RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ZNF275Q9NSD4 429 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-216ENST00000544996 LOC100289279A0A1B0GTE1 492 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 CRLF1O75462 422 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 RP2O75695 350 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 LCATP04180 440 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 ACSM4P0C7M7 580 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 CLUP10909 449 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 FCGR1AP12314 374 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF16P17020 682 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-216ENST00000544996 RPS27P42677 84 aaKnown RBP13.38□□□□□ -0.27
CCDC78-216ENST00000544996 MALLQ13021 153 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 HLXQ14774 488 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-216ENST00000544996 TAF13Q15543 124 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-216ENST00000544996 KRTAP27-1Q3LI81 207 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 TEX30Q5JUR7 227 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 FAM166AQ6J272 317 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 LYPD4Q6UWN0 246 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 DCXRQ7Z4W1 244 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 HIPK1Q86Z02 1210 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 OR5K1Q8NHB7 308 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 HCAR1Q9BXC0 346 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 C1QTNF5Q9BXJ0 243 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 PNRC2Q9NPJ4 139 aaKnown RBP13.38□□□□□ -0.27
CCDC78-216ENST00000544996 PTTG3PQ9NZH4 202 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 ZFHX3Q15911 3703 aa13.38□□□□□ -0.27
CCDC78-216ENST00000544996 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 FAM183AA6NL82 134 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 G3V2T6 193 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 M0R135 149 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CD55P08174 381 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 GSTT1P30711 240 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 SLC6A9P48067 706 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 TNFAIP6P98066 277 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CDK5Q00535 292 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CDK5R2Q13319 367 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CCNIQ14094 377 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 TRIP10Q15642 601 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 PCK2Q16822 640 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 KRTAP21-3Q3LHN1 58 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 PLBD1Q6P4A8 553 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 FAHD1Q6P587 224 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 ZDHHC13Q8IUH4 622 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 OR2Z1Q8NG97 314 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CCL17Q92583 94 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 MSI2Q96DH6 328 aaKnown RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 DUS3LQ96G46 650 aaKnown RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF799Q96GE5 643 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF582Q96NG8 517 aaPredicted RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 INTS14Q96SY0 518 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 COPS4Q9BT78 406 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 OR51V1Q9H2C8 321 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 MED20Q9H944 212 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CENPMQ9NSP4 180 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
CCDC78-216ENST00000544996 ZANQ9Y493 2812 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CR1P17927 2039 aa13.37□□□□□ -0.27
CCDC78-216ENST00000544996 CLDN25C9JDP6 229 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 SURF4O15260 269 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 LMX1BO60663 402 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 GLCEO94923 617 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 TGFAP01135 160 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 SELEP16581 610 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 TNFRSF1AP19438 455 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 SLC15A1P46059 708 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 CRISP1P54107 249 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 SLC3A1Q07837 685 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 ERI1Q8IV48 349 aaKnown RBP13.36□□□□□ -0.27
CCDC78-216ENST00000544996 OR5AS1Q8N127 324 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 PARP8Q8N3A8 854 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 SLAMF6Q96DU3 332 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
CCDC78-216ENST00000544996 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 NSD1Q96L73 2696 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-216ENST00000544996 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 EBAG9O00559 213 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 PRODHO43272 600 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 DAPP51397 102 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 CHRFAM7AQ494W8 412 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 KLHL12Q53G59 568 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 TMEM236Q5W0B7 351 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 OR2T2Q6IF00 324 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 DRAM2Q6UX65 266 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 SHFQ7M4L6 423 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
CCDC78-216ENST00000544996 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 LINC01356Q8N9X3 169 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 OR8G5Q8NG78 346 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 OR10S1Q8NGN2 331 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 OR6N2Q8NGY6 317 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms