RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 DUSP2Q05923 314 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 ZNF816Q0VGE8 651 aaPredicted RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 WDR88Q6ZMY6 472 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 GRINAQ7Z429 371 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 GPR119Q8TDV5 335 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 ANKRD12Q6UB98 2062 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 DLEU7Q6UYE1 221 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 OR2M7Q8NG81 312 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 SLCO4A1Q96BD0 722 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 IKZF5Q9H5V7 419 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TRAV20A0A0B4J274 112 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TMEM129A0AVI4 362 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 K7ESM1 405 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 EN2P19622 333 aaPredicted RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 GLRA1P23415 457 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 RTL8BQ17RB0 113 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 ISG20L2Q9H9L3 353 aaKnown RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 NUDT19A8MXV4 375 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 ASCL1P50553 236 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 OXA1LQ15070 435 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 LAIR1Q6GTX8 287 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 M1APQ8TC57 530 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TRMT61AQ96FX7 289 aaKnown RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 NDFIP1Q9BT67 221 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 RAB18Q9NP72 206 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
CHD4-210ENST00000544040 KLRC4-KLRK1H3BQV0 150 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 GLB1P16278 677 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TBXA2RP21731 343 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 YPEL5P62699 121 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 FAM174AQ8TBP5 190 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 SLC39A13Q96H72 371 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 OCEL1Q9H607 264 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 GPR84Q9NQS5 396 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 TIMM9Q9Y5J7 89 aa14.07□□□□□ -0.16
CHD4-210ENST00000544040 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 GMLQ99445 158 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 STACQ99469 402 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 CD37P11049 281 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 PIGPP57054 158 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 FER1L6-AS2Q96M78 137 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 HCFC2Q9Y5Z7 792 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 A0A1B0GTW7 788 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 E5RGE8 158 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 GPX2P18283 190 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 LHFPL2Q6ZUX7 228 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 CXCL16Q9H2A7 254 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 ING1Q9UK53 422 aaPredicted RBP14.06□□□□□ -0.16
CHD4-210ENST00000544040 NSG2Q9Y328 171 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 UBE2L5PA0A1B0GUS4 154 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
CHD4-210ENST00000544040 ZNF17P17021 662 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 DCTDP32321 178 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 RRADP55042 308 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 TMEM178AQ8NBL3 297 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 OR13H1Q8NG92 308 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 OR10AD1Q8NGE0 317 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 NUMA1Q14980 2115 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 PCBP4P57723 403 aaKnown RBP14.06□□□□□ -0.16
CHD4-210ENST00000544040 C11orf40Q8WZ69 217 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 PDXPQ96GD0 296 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 P2RY12Q9H244 342 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 UCK1Q9HA47 277 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 SLC22A13Q9Y226 551 aa14.06□□□□□ -0.16
CHD4-210ENST00000544040 MBLAC1A4D2B0 266 aaPredicted RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 H3BP45 60 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 M0R1B8 84 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 COX7A2P2O60397 106 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 RAB5AP20339 215 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 TSEN54Q7Z6J9 526 aaKnown RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 ERGIC1Q969X5 290 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 MMACHCQ9Y4U1 282 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 ATP23Q9Y6H3 246 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 SPINK4O60575 86 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 AMTP48728 403 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 CLDN20P56880 219 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 ERVFC1-1P60608 527 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 RAB1AP62820 205 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 SCPEP1Q9HB40 452 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 SLCO2B1O94956 709 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 ZFPM2Q8WW38 1151 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 MRPS24Q96EL2 167 aaKnown RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 LRFN3Q9BTN0 628 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 VAMP8Q9BV40 100 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 NRASP01111 189 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 SFTA3P0C7M3 94 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 KIR2DL3P43628 341 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 TPPP2P59282 170 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 PRSS36Q5K4E3 855 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 TRILQ7L0X0 811 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 ZNF561Q8N587 486 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 PLEKHB1Q9UF11 243 aaPredicted RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 HS3ST2Q9Y278 367 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 LTN1O94822 1766 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 BMPR1BO00238 502 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 SDHBP21912 280 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 APOBEC1P41238 236 aaKnown RBP14.05□□□□□ -0.16
CHD4-210ENST00000544040 CYHR1Q6ZMK1 362 aa14.05□□□□□ -0.16
CHD4-210ENST00000544040 NHLRC2Q8NBF2 726 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms