RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TBX1	O43435	398 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	RGS10	O43665	173 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	SULT1C4	O75897	302 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	GOSR1	O95249	250 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	PLAU	P00749	431 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	IGHA1	P01876	353 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	CDK1	P06493	297 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ACSM4	P0C7M7	580 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	NR4A1	P22736	598 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	CRHBP	P24387	322 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	C21orf33	P30042	268 aa	Predicted RBP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	RGS6	P49758	472 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	UCP2	P55851	309 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	OR12D2	P58182	307 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ACTA2	P62736	377 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ACTG2	P63267	376 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ROM1	Q03395	351 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	GALE	Q14376	348 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	RSPO1	Q2MKA7	263 aa	Predicted RBP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ZNF829	Q3KNS6	432 aa	Predicted RBP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	DRAM2	Q6UX65	266 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	FAM57B	Q71RH2	274 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	RHOU	Q7L0Q8	258 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	KCTD20	Q7Z5Y7	419 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	NAA40	Q86UY6	237 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	KLHL36	Q8N4N3	616 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	OR5L1	Q8NGL2	311 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	OR1J1	Q8NGS3	322 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	AKAP1	Q92667	903 aa	Known RBP eCLIP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	MARVELD3	Q96A59	401 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	PGAM5	Q96HS1	289 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	C4orf36	Q96KX1	117 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	YTHDF1	Q9BYJ9	559 aa	Known RBP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	BCL2L14	Q9BZR8	327 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	SP140L	Q9H930	580 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	CLEC2D	Q9UHP7	191 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	MRM2	Q9UI43	246 aa	Known RBP	8.78	□□□□□ -1
CPSF7-221	ENST00000543545	ERGIC3	Q9Y282	383 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	LRCH1	Q9Y2L9	728 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	CACNA1C	Q13936	2221 aa		8.78	□□□□□ -1
CPSF7-221	ENST00000543545	SHISA9	B4DS77	424 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	MYL12B	O14950	172 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SMPD2	O60906	423 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	CTAG2	O75638	210 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ATE1	O95260	518 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	NGF	P01138	241 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	MT-ND5	P03915	603 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	PCSK6	P29122	969 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	THBS4	P35443	961 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	PSMB10	P40306	273 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	WNT5A	P41221	380 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ETV1	P50549	477 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	FABP6	P51161	128 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	GBX2	P52951	348 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF121	P58317	390 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SELENOV	P59797	346 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	PPP1CB	P62140	327 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	RPS23	P62266	143 aa	Known RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	MVK	Q03426	396 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	MALL	Q13021	153 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	GFOD2	Q3B7J2	385 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	CDON	Q4KMG0	1287 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SPATA46	Q5T0L3	261 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	LIPN	Q5VXI9	398 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF787	Q6DD87	383 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	RGS7BP	Q6MZT1	257 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF544	Q6NX49	715 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ZNF101	Q8IZC7	436 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SPRYD4	Q8WW59	207 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SGCD	Q92629	289 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	NEUROG1	Q92886	237 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	APOBEC3D	Q96AK3	386 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	COG8	Q96MW5	612 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	DOK1	Q99704	481 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	OR10A2	Q9H208	303 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	CLEC4M	Q9H2X3	399 aa	Predicted RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	DUSP21	Q9H596	190 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ISG20L2	Q9H9L3	353 aa	Known RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	UBTD1	Q9HAC8	227 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ACOXL	Q9NUZ1	547 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	TBCCD1	Q9NVR7	557 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	FKBP14	Q9NWM8	211 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	CISD1	Q9NZ45	108 aa	Known RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	PTTG3P	Q9NZH4	202 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	FZR1	Q9UM11	496 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	STARD10	Q9Y365	291 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	SNX5	Q9Y5X3	404 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545		R4GMQ9	66 aa		8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545	ANKHD1	Q8IWZ3	2542 aa	Known RBP	8.77	□□□□□ -1.01
CPSF7-221	ENST00000543545		E7EQL1	145 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	LOC110117498-PIK3R3	F6TDL0	507 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	GPRIN2	O60269	458 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	MT-ND2	P03891	347 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	HTR1A	P08908	422 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	ADRA2A	P08913	450 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	LIMS3	P0CW19	117 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	LIMS4	P0CW20	117 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	LOX	P28300	417 aa	Predicted RBP	8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	GCH1	P30793	250 aa		8.76	□□□□□ -1.01
CPSF7-221	ENST00000543545	SSTR2	P30874	369 aa		8.76	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms