RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SDHAF3Q9NRP4 125 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 OR1A1Q9P1Q5 309 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ABCD2Q9UBJ2 740 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 CTSZQ9UBR2 303 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 ARL2BPQ9Y2Y0 163 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 RBMX2Q9Y388 322 aaKnown RBP3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 MYH6P13533 1939 aa3.1□□□□□ -1.91
SFSWAP-211ENST00000542813 IGLV3-22A0A075B6J6 115 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 A0A087X0T9 212 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 C1orf232A0A0U1RR37 186 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM231BA6NCW3 169 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 DHRS7CA6NNS2 312 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 A8MUA0 341 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ANKRD63C9JTQ0 380 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SAP18O00422 153 aaKnown RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SOCS3O14543 225 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC9A3R1O14745 358 aaPredicted RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 AQP9O43315 295 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PSMG1O95456 288 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CD160O95971 181 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 RENP00797 406 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 IFNA14P01570 189 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 DCNP07585 359 aaKnown RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 MELTFP08582 738 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SNRPAP09012 282 aaKnown RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM228BP0C875 321 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TAC1P20366 129 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 VDAC1P21796 283 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CCNE1P24864 410 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ADORA1P30542 326 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SPAM1P38567 509 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TNFSF9P41273 254 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 KIR2DS2P43631 304 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 GPR1P46091 355 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SLCO1A2P46721 670 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SSR4P51571 173 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PSMC5P62195 406 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PAX2Q02962 417 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF33AQ06730 810 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CDC20Q12834 499 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SERTAD2Q14140 314 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 KCNJ8Q15842 424 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 USF2Q15853 346 aaPredicted RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ACSBG2Q5FVE4 666 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 NHLRC3Q5JS37 347 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM31Q5JXX7 168 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 MARCH8Q5T0T0 291 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 LEMD1Q68G75 181 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 DUPD1Q68J44 220 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 Q6ZN92 141 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 MBOAT1Q6ZNC8 495 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ARCQ7LC44 396 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PEX26Q7Z412 305 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SNX20Q7Z614 316 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CMC1Q7Z7K0 106 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 AKAP14Q86UN6 197 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC26A11Q86WA9 606 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 NELFCDQ8IXH7 590 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PIANPQ8IYJ0 282 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TRAM1L1Q8N609 369 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 OR6T1Q8NGN1 323 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 OR2A12Q8NGT7 310 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF502Q8TBZ5 544 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ACTRT1Q8TDG2 376 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CXorf40AQ8TE69 158 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 C10orf82Q8WW14 230 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 SMARCD2Q92925 531 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 APH1AQ96BI3 265 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 POM121L2Q96KW2 1035 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 GLT1D1Q96MS3 346 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 LITAFQ99732 161 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 KCTD14Q9BQ13 255 aaPredicted RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 HINT2Q9BX68 163 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 FGFBP2Q9BYJ0 223 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TRIM15Q9C019 465 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ZYG11BQ9C0D3 744 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 RAB1BQ9H0U4 201 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ADNPQ9H2P0 1102 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 RNF167Q9H6Y7 350 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CSNK1G1Q9HCP0 422 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CD209Q9NNX6 404 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 IL26Q9NPH9 171 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 MIEF1Q9NQG6 463 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 TXLNGQ9NUQ3 528 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CCDC59Q9P031 241 aaKnown RBP3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ARMCX1Q9P291 453 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CTSFQ9UBX1 484 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CD300AQ9UGN4 299 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 AP3M1Q9Y2T2 418 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 CDH10Q9Y6N8 788 aa3.09□□□□□ -1.91
SFSWAP-211ENST00000542813 ATRXP46100 2492 aa3.09□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF646O15015 1829 aaPredicted RBP3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 IGKV2D-30A0A075B6S6 120 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 IGKV1D-8A0A087WSZ0 117 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 IGHV1OR21-1A0A087WYE8 117 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CCL15-CCL14A0A0B4J2E2 113 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 RAB19A4D1S5 217 aa3.08□□□□□ -1.92
SFSWAP-211ENST00000542813 CENPXA8MT69 81 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms