RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RNF122Q9H9V4 155 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CALHM2Q9HA72 323 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 POPDC2Q9HBU9 364 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 CSNK1G1Q9HCP0 422 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SIRT7Q9NRC8 400 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 C1orf123Q9NWV4 160 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 DDIT4Q9NX09 232 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 VNN3Q9NY84 501 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 GPR83Q9NYM4 423 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 KLRF1Q9NZS2 232 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ZNF639Q9UID6 485 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NDRG2Q9UN36 371 aaKnown RBP2.64□□□□□ -1.99
USP28-210ENST00000542033 FBXO7Q9Y3I1 522 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 RNF115Q9Y4L5 304 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 WIF1Q9Y5W5 379 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SLCO1B1Q9Y6L6 691 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ATP10DQ9P241 1426 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SAMD9LQ8IVG5 1584 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 NEURL4Q96JN8 1562 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 KNDC1Q76NI1 1749 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 IFT172Q9UG01 1749 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 ANKRD26Q9UPS8 1709 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PCM1Q15154 2024 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 PREX2Q70Z35 1606 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 MYO3AQ8NEV4 1616 aa2.64□□□□□ -1.99
USP28-210ENST00000542033 SCN4AP35499 1836 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ARID2Q68CP9 1835 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 QRICH2Q9H0J4 1663 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 URB2Q14146 1524 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 ABCA8O94911 1581 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 GLI2P10070 1586 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 A0A0A6YYD4 124 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 NPIPA5A0A0B4J1W7 369 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PPIAL4CA0A0B4J2A2 164 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 A0A1W2PPV4 95 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 GLTPD2A6NH11 291 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 BTNL10A8MVZ5 291 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 EPM2AB3EWF7 344 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 NPIPA5E9PKD4 350 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 G3V2L1 256 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 AIPO00170 330 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 DFFAO00273 331 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CYB561D2O14569 222 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 EI24O14681 340 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TP53I11O14683 189 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SCAMP2O15127 329 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 CHST10O43529 356 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 OR10H3O60404 316 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 EDF1O60869 148 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 B4GALT2O60909 372 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 NXPH4O95158 308 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 LALBAP00709 142 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SERPINA3P01011 423 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 IFNA21P01568 189 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 FTH1P02794 183 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MT-ND1P03886 318 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ADORA3P0DMS8 318 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PPIAL4GP0DN37 164 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 MYL2P10916 166 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF7P17097 686 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 RAB3BP20337 219 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TAC1P20366 129 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ATP6V1B2P21281 511 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 BCKDHBP21953 392 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 UQCRC2P22695 453 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 HMGB2P26583 209 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 SHC1P29353 583 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 GNRHRP30968 328 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 SHMT2P34897 504 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 P2RY2P41231 377 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 HTR5AP47898 357 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PGFP49763 221 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RGS4P49798 205 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 PPT1P50897 306 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CCR6P51684 374 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 XKP51811 444 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 KLF3P57682 345 aaPredicted RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 DAOAP59103 153 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TAS2R39P59534 338 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ERVS71-1P61550 626 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 IFITM3Q01628 133 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CSTF1Q05048 431 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 PRKCDQ05655 676 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CHRNB3Q05901 458 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 TGM3Q08188 693 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ITPK1Q13572 414 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 RCAN2Q14206 197 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ATP6AP1Q15904 470 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 IMPG1Q17R60 797 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 LINC01620Q4KN68 170 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 Q5BKY6 102 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 AVPI1Q5T686 147 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 KHDRBS2Q5VWX1 349 aaKnown RBP2.63□□□□□ -1.99
USP28-210ENST00000542033 LEMD1Q68G75 181 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CGB2Q6NT52 195 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF343Q6P1L6 599 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 CLEC18BQ6UXF7 455 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 BAIAP2L2Q6UXY1 529 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 ZNF562Q6V9R5 426 aa2.63□□□□□ -1.99
USP28-210ENST00000542033 HSDL2Q6YN16 418 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms