RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NOP16Q9Y3C1 178 aaKnown RBP9.34□□□□□ -0.91
CHFR-219ENST00000541341 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 A0A0G2JN53 185 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 A0A1W2PPK0 400 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 SYNDIG1LA6NDD5 238 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ELOA3DA6NLF2 546 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 F8VVB4 439 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 F8VWA3 439 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 WRBO00258 174 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 DVL2O14641 736 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 DUS4LO95620 317 aaKnown RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 IL2RAP01589 272 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 S100A6P06703 90 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ERCC1P07992 297 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 PSMB6P28072 239 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 GALNSP34059 522 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 NAA10P41227 235 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 FOXK1P85037 733 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 TRA2AQ13595 282 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHFR-219ENST00000541341 TAF13Q15543 124 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 STK11Q15831 433 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 HFEQ30201 348 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ELOA3BQ3SY89 546 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 RNASE10Q5GAN6 216 aaKnown RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 LIPNQ5VXI9 398 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 NSUN5P2Q63ZY6 315 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 RTL6Q6ICC9 239 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 FAM111BQ6SJ93 734 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ZNF704Q6ZNC4 412 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 ESPNLQ6ZVH7 1005 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 SSX6Q7RTT6 188 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ADGRE4PQ86SQ3 457 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 CDC20BQ86Y33 519 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 KDM8Q8N371 416 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ZNF561Q8N587 486 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 AMER3Q8N944 861 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ELOA3Q8NG57 546 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 OR13C5Q8NGS8 318 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 OR2G2Q8NGZ5 317 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 OR8K3Q8NH51 312 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 TSEN15Q8WW01 171 aaKnown RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 TMEM106AQ96A25 262 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 INTS14Q96SY0 518 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 NRTNQ99748 197 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ZNF251Q9BRH9 671 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 ATG5Q9H1Y0 275 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 XKR8Q9H6D3 395 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 TUBA4BQ9H853 241 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 BARX1Q9HBU1 254 aaPredicted RBP9.33□□□□□ -0.92
CHFR-219ENST00000541341 CTSFQ9UBX1 484 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 PRODH2Q9UF12 536 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 RAB22AQ9UL26 194 aa9.33□□□□□ -0.92
CHFR-219ENST00000541341 MED13Q9UHV7 2174 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 ZC3H12DA2A288 527 aaKnown RBP9.32□□□□□ -0.92
CHFR-219ENST00000541341 OR6C74A6NCV1 312 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 OR4C45A6NMZ5 311 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 C2orf74A8MZ97 194 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 B4E171 279 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 LGALS8O00214 317 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 XKRYO14609 159 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 TOX3O15405 576 aaPredicted RBP9.32□□□□□ -0.92
CHFR-219ENST00000541341 UPK3AO75631 287 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 AMY2AP04746 511 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 IFNA6P05013 189 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 ZNF888P0CJ79 500 aaPredicted RBP9.32□□□□□ -0.92
CHFR-219ENST00000541341 CD79AP11912 226 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 RNH1P13489 461 aaKnown RBP9.32□□□□□ -0.92
CHFR-219ENST00000541341 TCN2P20062 427 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 ADH6P28332 368 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 HTR2CP28335 458 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 CASRP41180 1078 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 TSPAN7P41732 249 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
CHFR-219ENST00000541341 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 POU3F4P49335 361 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 CD81P60033 236 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 PJVKQ0ZLH3 352 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 SMCO1Q147U7 214 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 PRICKLE4Q2TBC4 344 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 TMEM255AQ5JRV8 349 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 SLC18B1Q6NT16 456 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 LEG1Q6P5S2 330 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 DEGS2Q6QHC5 323 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 NHLRC1Q6VVB1 395 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 BPIFB2Q8N4F0 458 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 DMBX1Q8NFW5 382 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 OR4K17Q8NGC6 315 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 OR6S1Q8NH40 331 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 CTHRC1Q96CG8 243 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 TGM7Q96PF1 710 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 CHRNA10Q9GZZ6 450 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
CHFR-219ENST00000541341 HRASLS2Q9NWW9 162 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms