RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 OR4C16Q8NGL9 310 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 OR10R2Q8NGX6 335 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 AMELYQ99218 206 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 COMMD4Q9H0A8 199 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 OR2A4O95047 310 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 SPARCP09486 303 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 NKAIN1Q4KMZ8 207 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 BEST3Q8N1M1 668 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 STT3BQ8TCJ2 826 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 ZNF285Q96NJ3 590 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 OR2A7Q96R45 310 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 ATG5Q9H1Y0 275 aa12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 RPH3AQ9Y2J0 694 aaPredicted RBP12.83□□□□□ -0.36
SFSWAP-210ENST00000541286 A0A1W2PPE3 182 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 M0QYG6 137 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 ACOT7O00154 380 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 SCDO00767 359 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 CTNSO60931 367 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 S100A6P06703 90 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 RNF224P0DH78 156 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 TACR3P29371 465 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 MPGP29372 298 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 RPL18Q07020 188 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 LURAP1LQ8IV03 231 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 NUBPLQ8TB37 319 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 GLYATL2Q8WU03 294 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 LPAR4Q99677 370 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 ZNF426Q9BUY5 554 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 A0A1B0GX78 115 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 TMEM218A2RU14 115 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 PRAF2O60831 178 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 STK17BO94768 372 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 ACTL6AO96019 429 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 CD14P08571 375 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 FBLP22087 321 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 PTAFRP25105 342 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 PRPS1P60891 318 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 NSDHLQ15738 373 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 MEP1BQ16820 701 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 LINC01590Q5TEZ4 76 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 BAIAP2L2Q6UXY1 529 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 DND1Q8IYX4 353 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 SPICQ8N5J4 248 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 FAM71CQ8NEG0 241 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 VN1R1Q9GZP7 353 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
SFSWAP-210ENST00000541286 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 RAG2P55895 527 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 VASH2Q86V25 355 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 ZNF227Q86WZ6 799 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 OR1M1Q8NGA1 313 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 ZNF524Q96C55 264 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 LANCL2Q9NS86 450 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 ICAM5Q9UMF0 924 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 PTPRBP23467 1997 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 IGKV1D-42A0A075B6H8 117 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 XKRYO14609 159 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 NSA2O95478 260 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 F10P00742 488 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 CD3DP04234 171 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 RFC3P40938 356 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 MAP3K8P41279 467 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 NUBP1P53384 320 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 FOXC1Q12948 553 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 SMCO1Q147U7 214 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 GLT8D1Q68CQ7 371 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 RHOUQ7L0Q8 258 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 SPAG16Q8N0X2 631 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 HAVCR1Q96D42 359 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 HRH4Q9H3N8 390 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 ELOVL3Q9HB03 270 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 SEMA5BQ9P283 1151 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 PTPRQQ9UMZ3 2332 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 NDUFB6O95139 128 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 GP1BAP07359 652 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 DAOP14920 347 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 MNDAP41218 407 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 POU3F4P49335 361 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 TOMM34Q15785 309 aaPredicted RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 EXOSC6Q5RKV6 272 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 ZNF704Q6ZNC4 412 aaPredicted RBP12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 NAA40Q86UY6 237 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 SVBPQ8N300 66 aa12.81□□□□□ -0.36
SFSWAP-210ENST00000541286 OR2G2Q8NGZ5 317 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms