RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 FAM27D1Q5T7N8 215 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR52N5Q8NH56 324 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR2AE1Q8NHA4 323 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR10J5Q8NHC4 309 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 PLA2G12AQ9BZM1 189 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 TM7SF3Q9NS93 570 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC35D1Q9NTN3 355 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 RREB1Q92766 1687 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR4F5Q8NH21 305 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 NTNG2Q96CW9 530 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 SAT2Q96F10 170 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
SMARCA4-207ENST00000541122 FCMRO60667 390 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 ACKR1Q16570 336 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 FAM209AQ5JX71 171 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 MRM1Q6IN84 353 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC39A5Q6ZMH5 540 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 HGDQ93099 445 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 LINC00052Q96N35 136 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CHST11Q9NPF2 352 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 OBP2BQ9NPH6 170 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC6A13Q9NSD5 602 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 GPR31O00270 319 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 APEHP13798 732 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 FPR2P25090 351 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF426Q9BUY5 554 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 ELOA3CA0A087WX78 387 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 FZD6O60353 706 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 TOX4O94842 621 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 OPN1LWP04000 364 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A6P0DMU7 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A5P0DMU8 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A7P0DMV0 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A8P0DMV1 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A9P0DMV2 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 GDF1P27539 372 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 RPL18Q07020 188 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 COL9A2Q14055 689 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC10A1Q14973 349 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 PYCR3Q53H96 274 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A2Q5DJT8 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A1Q5HYN5 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CT45A3Q8NHU0 189 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 TMEM268Q5VZI3 342 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 UBAC2Q8NBM4 344 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 OR51E1Q8TCB6 317 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 CORO2AQ92828 525 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 SIGLEC11Q96RL6 698 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 MARCH5Q9NX47 278 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 B3GAT1Q9P2W7 334 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 GNG12Q9UBI6 72 aa13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 BOKQ9UMX3 212 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-207ENST00000541122 PRSS37A4D1T9 235 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 UPK1AO00322 258 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SULT1A3P0DMM9 295 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SULT1A4P0DMN0 295 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 NOVA1P51513 510 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SMUG1Q53HV7 270 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 LRRTM1Q86UE6 522 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 PRRX2Q99811 253 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 TEX101Q9BY14 249 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF814B7Z6K7 855 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 AP4M1O00189 453 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SSSCA1O60232 199 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 ABLIM3O94929 683 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 GLAP06280 429 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 OR5H8P0DN80 308 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 COX5AP20674 150 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 HSF1Q00613 529 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 PCK2Q16822 640 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 C4orf17Q53FE4 359 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 TMPRSS11FQ6ZWK6 438 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF429Q86V71 674 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 MUC20Q8N307 709 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 WFDC5Q8TCV5 224 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 LAMP3Q9UQV4 416 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 MICAL3Q7RTP6 2002 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 CXorf51AA0A1B0GTR3 108 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 SEC14L6B5MCN3 397 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 THEM4Q5T1C6 240 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 LHFPL2Q6ZUX7 228 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 MARCH3Q86UD3 253 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 IL22RA1Q8N6P7 574 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 TXNIPQ9H3M7 391 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 NPBWR1P48145 328 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 WNT3P56703 355 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 KIAA0040Q15053 153 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 VAMP3Q15836 100 aa13.59□□□□□ -0.23
SMARCA4-207ENST00000541122 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms