RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RNF113BQ8IZP6 322 aaKnown RBP22.28■■□□□ 1.16
CHFR-218ENST00000540963 CDADC1Q9BWV3 514 aa22.28■■□□□ 1.16
CHFR-218ENST00000540963 ASH2LQ9UBL3 628 aa22.28■■□□□ 1.16
CHFR-218ENST00000540963 SLC22A31A6NKX4 558 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 EFCAB9A8MZ26 197 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 F5H5P2 479 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 H0YL77 283 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 CFHR2P36980 270 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 KRTAP10-3P60369 221 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 CCDC92Q53HC0 331 aaPredicted RBP22.27■■□□□ 1.16
CHFR-218ENST00000540963 LINC01006Q8NI28 216 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 GATAD2BQ8WXI9 593 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 PCGF1Q9BSM1 259 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 TMEM100Q9NV29 134 aa22.27■■□□□ 1.16
CHFR-218ENST00000540963 ZNF879B4DU55 563 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 C22orf46C9J442 243 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 NPPAP01160 153 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 CTLA4P16410 223 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 RPL4P36578 427 aaKnown RBP22.26■■□□□ 1.15
CHFR-218ENST00000540963 PMELP40967 661 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 PROK1P58294 105 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 KCNJ8Q15842 424 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 CYBRD1Q53TN4 286 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 MESTQ5EB52 335 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 LYPD2Q6UXB3 125 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 FAM122BQ7Z309 247 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 GLB1L2Q8IW92 636 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 MICU2Q8IYU8 434 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 OFCC1Q8IZS5 231 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 TRIM15Q9C019 465 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 NDEL1Q9GZM8 345 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 ACOXLQ9NUZ1 547 aa22.26■■□□□ 1.15
CHFR-218ENST00000540963 TROVE2P10155 538 aaKnown RBP eCLIP22.25■■□□□ 1.15
CHFR-218ENST00000540963 MMP9P14780 707 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 SELENOWP63302 87 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 TRAM2Q15035 370 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 FAM201AQ5SY85 155 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 RUSC1-AS1Q66K80 236 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 OR13C2Q8NGS9 318 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 OR11L1Q8NGX0 322 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 Q96M85 177 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 COQ7Q99807 217 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 HCAR1Q9BXC0 346 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 HDHD2Q9H0R4 259 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 CMTM6Q9NX76 183 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 ADAM18Q9Y3Q7 739 aa22.25■■□□□ 1.15
CHFR-218ENST00000540963 CENPVL3A0A0U1RRI6 287 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 KHDRBS3O75525 346 aaKnown RBP22.24■■□□□ 1.15
CHFR-218ENST00000540963 TOX4O94842 621 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 DBHP09172 617 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 FPR3P25089 353 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 KDELR2P33947 212 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 KCNMB1Q16558 191 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 TMPRSS11FQ6ZWK6 438 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 ACOT11Q8WXI4 607 aaPredicted RBP22.24■■□□□ 1.15
CHFR-218ENST00000540963 ZNF570Q96NI8 536 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 CCDC134Q9H6E4 229 aa22.24■■□□□ 1.15
CHFR-218ENST00000540963 BBIP1A8MTZ0 92 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 RER1O15258 196 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 GPR137BO60478 399 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 HIST1H3AP68431 136 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 C11orf91Q3C1V1 193 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 ZBED5Q49AG3 693 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 HIST2H3PS2Q5TEC6 136 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 PGM2L1Q6PCE3 622 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 COLCA1Q6ZS62 124 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 HIST2H3AQ71DI3 136 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 LDLRAD3Q86YD5 345 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 PNLDC1Q8NA58 520 aaKnown RBP22.23■■□□□ 1.15
CHFR-218ENST00000540963 GJC3Q8NFK1 279 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 WDFY2Q96P53 400 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 TBX15Q96SF7 602 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 FNDC11Q9BVV2 318 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 NMNAT1Q9HAN9 279 aaPredicted RBP22.23■■□□□ 1.15
CHFR-218ENST00000540963 ERVK-18Q9QC07 812 aa22.23■■□□□ 1.15
CHFR-218ENST00000540963 SLC16A7O60669 478 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 SFTPBP07988 381 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 CD200P41217 278 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 RAD23AP54725 363 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 MAB21L1Q13394 359 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 LRRC23Q53EV4 343 aaPredicted RBP22.22■■□□□ 1.15
CHFR-218ENST00000540963 GPR139Q6DWJ6 353 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 BHLHE23Q8NDY6 225 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 LZICQ8WZA0 190 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 RCN3Q96D15 328 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 TPD52L3Q96J77 140 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 TCF7L1Q9HCS4 588 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 TRIM36Q9NQ86 728 aa22.22■■□□□ 1.15
CHFR-218ENST00000540963 VSX1Q9NZR4 365 aaPredicted RBP22.22■■□□□ 1.15
CHFR-218ENST00000540963 COA3Q9Y2R0 106 aaPredicted RBP22.22■■□□□ 1.15
CHFR-218ENST00000540963 IGHV1-69DA0A0B4J2H0 117 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 IGHV3-64DA0A0J9YX35 117 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 FAM220BPB1ANY3 271 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 IGHV1-69P01742 117 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 SDHAP31040 664 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 FBLN7Q53RD9 439 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 CLEC12AQ5QGZ9 265 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 METTL11BQ5VVY1 283 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 MBOAT2Q6ZWT7 520 aa22.21■■□□□ 1.15
CHFR-218ENST00000540963 ZSCAN4Q8NAM6 433 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms