RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 MYL12AP19105 171 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PCSK6P29122 969 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 WNT5AP41221 380 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 WNT4P56705 351 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 OR12D2P58182 307 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 NANOS3P60323 173 aaKnown RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 UBE2NP61088 152 aaKnown RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 GRB2P62993 217 aaKnown RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 NKX6-1P78426 367 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 MFGE8Q08431 387 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 RAB39AQ14964 217 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 TP53I3Q53FA7 332 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 SYT6Q5T7P8 510 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 LIPNQ5VXI9 398 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 KRT74Q7RTS7 529 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 ZNF367Q7RTV3 350 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 DMRTC2Q8IXT2 367 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PAQR4Q8N4S7 273 aaPredicted RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 OR2AJ1Q8NGZ0 328 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 SLC7A6Q92536 515 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 C4orf36Q96KX1 117 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PGLYRP3Q96LB9 341 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 C4orf45Q96LM5 186 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 DACH2Q96NX9 599 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 OR5M11Q96RB7 305 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 MND1Q9BWT6 205 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 MOB1AQ9H8S9 216 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 ELOVL3Q9HB03 270 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 G6PC2Q9NQR9 355 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 NUFIP1Q9UHK0 495 aaKnown RBP9.13□□□□□ -0.95
VPS33A-204ENST00000540669 PKDREJQ9NTG1 2253 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 ROS1P08922 2347 aa9.13□□□□□ -0.95
VPS33A-204ENST00000540669 IGHV2OR16-5A0A0B4J2B6 119 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 A0A1W2PR80 420 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 FAM221AA4D161 298 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 C5orf63A6NC05 138 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 MAGEA13PA6NCF6 341 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ACOD1A6NK06 481 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 M0R135 149 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 OGG1O15527 345 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CLDN1O95832 211 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 MT-ND5P03915 603 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 TFAP2AP05549 437 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 KRT8P05787 483 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 LCKP06239 509 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CD79AP11912 226 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CCL1P22362 96 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 APEX1P27695 318 aaKnown RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 HOXC12P31275 282 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ATP6V1E1P36543 226 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 KIR3DL2P43630 455 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 MAP2K4P45985 399 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 HTR5AP47898 357 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ALDH3B2P48448 385 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 IDH3GP51553 393 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CCR9P51686 369 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 GP2P55259 537 aaKnown RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 NAAAQ02083 359 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 MLLT11Q13015 90 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 TPBGQ13641 420 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CCDC58Q4VC31 144 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SP5Q6BEB4 398 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 DRAM2Q6UX65 266 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 RFPL4BQ6ZWI9 263 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ZNF101Q8IZC7 436 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 PRSS35Q8N3Z0 413 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 KLHL36Q8N4N3 616 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SVOPQ8N4V2 548 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SLC30A7Q8NEW0 376 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SPRYD4Q8WW59 207 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 RGP1Q92546 391 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 FCGR1BQ92637 280 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SPSB4Q96A44 273 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ZNF799Q96GE5 643 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 COG8Q96MW5 612 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 OPALINQ96PE5 141 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 MROQ9BYG7 248 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 TTTY10Q9BZA0 68 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 ZNF319Q9P2F9 582 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 SIRT4Q9Y6E7 314 aaPredicted RBP9.12□□□□□ -0.95
VPS33A-204ENST00000540669 R4GMQ9 66 aa9.12□□□□□ -0.95
VPS33A-204ENST00000540669 NBPF19A0A087WUL8 3843 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 APCP25054 2843 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 A0A0U1RQV5 110 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 DPRXA6NFQ7 191 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 MYL12BO14950 172 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 SMPD2O60906 423 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 SC5DO75845 299 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 GOSR1O95249 250 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 CD40P25942 277 aa9.11□□□□□ -0.95
VPS33A-204ENST00000540669 STOMP27105 288 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms