RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 ITLN1Q8WWA0 313 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 MRPL22Q9NWU5 206 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 ACTR3BQ9P1U1 418 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 KCNG2Q9UJ96 466 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 TMCC3Q9ULS5 477 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 PPP1R3CQ9UQK1 317 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 LYVE1Q9Y5Y7 322 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 V9GYQ6 96 aa11.03□□□□□ -0.64
SEMA4D-223ENST00000540475 NBEAL1Q6ZS30 2694 aa11.02□□□□□ -0.64
SEMA4D-223ENST00000540475 TRAPPC2LH3BP13 241 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 BHLHE40O14503 412 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 MLNRO43193 412 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 SBK2P0C263 348 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 GATA4P43694 442 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 HNRNPA0Q13151 305 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 ZMYND11Q15326 602 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 OR2T2Q6IF00 324 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 CORO6Q6QEF8 472 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 CFAP77Q6ZQR2 320 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 JAZF1Q86VZ6 243 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 ZDHHC21Q8IVQ6 265 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 ARHGAP24Q8N264 748 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 DEFB108BQ8NET1 73 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 ST7LQ8TDW4 575 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 DVL3Q92997 716 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 MEGF10Q96KG7 1140 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF582Q96NG8 517 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 IFT27Q9BW83 186 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 C7orf69Q9H7B7 122 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 RPRD1BQ9NQG5 326 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 PTTG3PQ9NZH4 202 aa11.02□□□□□ -0.65
SEMA4D-223ENST00000540475 TCRBV5S2A0A599 114 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 ISPDA4D126 451 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 WNT2P09544 360 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 SELEP16581 610 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF12P17014 697 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MDH2P40926 338 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MMP16P51512 607 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MNAT1P51948 309 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 LCN2P80188 198 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 PAX2Q02962 417 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 GK2Q14410 553 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 PCK2Q16822 640 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MUC20Q8N307 709 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 SDR9C7Q8NEX9 313 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 OR52E2Q8NGJ4 325 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 POP5Q969H6 163 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 DACT3Q96B18 629 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MAP6Q96JE9 813 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 ATF6BQ99941 703 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 BTBD10Q9BSF8 475 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 TMEM165Q9HC07 324 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 MMP26Q9NRE1 261 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 DDX28Q9NUL7 540 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 UBAP1Q9NZ09 502 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 POLR1DQ9Y2S0 133 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 INSIG2Q9Y5U4 225 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 CDH10Q9Y6N8 788 aa11.01□□□□□ -0.65
SEMA4D-223ENST00000540475 H0YL77 283 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 GASTP01350 101 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 NOS3P29474 1203 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 RBMXP38159 391 aaKnown RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 CENPAP49450 140 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 SRP9P49458 86 aaKnown RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 GYS2P54840 703 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 GNGT1P63211 74 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 PAX8Q06710 450 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 DBPQ10586 325 aaPredicted RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 TRAP1Q12931 704 aaKnown RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNF154Q13106 437 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 TEX30Q5JUR7 227 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 LCN8Q6JVE9 175 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 RASSF6Q6ZTQ3 369 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 NAA40Q86UY6 237 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 OR5AS1Q8N127 324 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 LNX2Q8N448 690 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 FITM2Q8N6M3 262 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 ATG16L2Q8NAA4 619 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 OR10S1Q8NGN2 331 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 Q8TCH9 128 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 ZNRF4Q8WWF5 429 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 ERGIC1Q969X5 290 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 PITX2Q99697 317 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 RBM4Q9BWF3 364 aaKnown RBP11□□□□□ -0.65
SEMA4D-223ENST00000540475 SUCNR1Q9BXA5 334 aa11□□□□□ -0.65
SEMA4D-223ENST00000540475 NMNAT2Q9BZQ4 307 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms