RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 NR2F1P10589 423 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 EDNRAP25101 427 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TAS2R38P59533 333 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM220Q6QAJ8 160 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 LYG2Q86SG7 212 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 GJD3Q8N144 294 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 CBARPQ8N350 705 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 OR13D1Q8NGV5 346 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 HDAC8Q9BY41 377 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 EIF5A2Q9GZV4 153 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TAF9BQ9HBM6 251 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 MRPS33Q9Y291 106 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 FBXO7Q9Y3I1 522 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 PUS1Q9Y606 427 aaKnown RBP eCLIP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TRAV18A0A075B6X5 111 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TGIF2-C20orf24A0A0A6YYL0 155 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 CYB5BO43169 146 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 RAMP1O60894 148 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM127O75204 238 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 NXPH2O95156 264 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ADH1BP00325 375 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 TSFMP43897 325 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 CDKN1BP46527 198 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ERVFC1-1P60608 527 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 AGBL4Q5VU57 503 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 OR1N1Q8NGS0 311 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 MITD1Q8WV92 249 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 DIO2Q92813 273 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 MRGPRX1Q96LB2 322 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 KCNJ16Q9NPI9 418 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 LANCL2Q9NS86 450 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 SEMA5BQ9P283 1151 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF223Q9UK11 482 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 MMP17Q9ULZ9 603 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 FARSAQ9Y285 508 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 URGCP-MRPS24S4R325 110 aa8.52□□□□□ -1.05
CTNNA1-243ENST00000540387 PLXND1Q9Y4D7 1925 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TRBV5-4A0A0C4DH59 114 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SIAH2O43255 324 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SYT7O43581 403 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 CBR3O75828 277 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 WNT11O96014 354 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TGFB1P01137 390 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 PRSS3P35030 304 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 PSMB10P40306 273 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 NPY4RP50391 375 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ERVFRD-1P60508 538 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 HERPUD1Q15011 391 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 AMZ1Q400G9 498 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM205Q6UW68 189 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF573Q86YE8 665 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 AMER3Q8N944 861 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 IFI44Q8TCB0 444 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 PHB2Q99623 299 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 PARD6GQ9BYG4 376 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 PARP12Q9H0J9 701 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TCEAL2Q9H3H9 227 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 P2RX2Q9UBL9 471 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ICKQ9UPZ9 632 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 VSIG4Q9Y279 399 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 NUMA1Q14980 2115 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 NCOR1O75376 2440 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TCRBV21S2A2A0A5A6 115 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 AMBPP02760 352 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 KLK1P06870 262 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 OR13C7P0DN81 318 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 EPHA1P21709 976 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 GABRR1P24046 479 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 MANFP55145 182 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 TAS2R19P59542 299 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTC1P68032 377 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ACTA1P68133 377 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ST3GAL3Q11203 375 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 HSPB3Q12988 150 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 EBPQ15125 230 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 MIDNQ504T8 468 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 RPL22L1Q6P5R6 122 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC22A25Q6T423 547 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 STAC2Q6ZMT1 411 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SFXN5Q8TD22 340 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 CASTOR1Q8WTX7 329 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 RSC1A1Q92681 617 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 MOAP1Q96BY2 351 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SHDQ96IW2 340 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 STACQ99469 402 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 NKX3-1Q99801 234 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 FAAP24Q9BTP7 215 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC5A7Q9GZV3 580 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 CST11Q9H112 138 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 OR52D1Q9H346 318 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 LPAR2Q9HBW0 351 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 CUTCQ9NTM9 273 aa8.51□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF346Q9UL40 294 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms