RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SSNA1O43805 119 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 SCELO95171 688 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 WNT11O96014 354 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 CD5P06127 495 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 CXCL3P19876 107 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 TAS2R50P59544 299 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 HERV-K104P63124 156 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 TMEM249Q2WGJ8 235 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 FCRLAQ7L513 359 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 NUFIP2Q7Z417 695 aaKnown RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 COMMD2Q86X83 199 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 OR4K1Q8NGD4 311 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 OR4K14Q8NGD5 310 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 RPUSD4Q96CM3 377 aaKnown RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 LCORQ96JN0 433 aaPredicted RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.59
DDX55-206ENST00000539934 SMURF2Q9HAU4 748 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 ADAM29Q9UKF5 820 aa11.33□□□□□ -0.59
DDX55-206ENST00000539934 LRP4O75096 1905 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 A0A087WV48 116 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 OR2W5A6NFC9 320 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 C9J4A7 227 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 MCRIP1C9JLW8 97 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 K7ERU9 68 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 YY2O15391 372 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX55-206ENST00000539934 MT-ND1P03886 318 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 SERPIND1P05546 499 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 HKR1P10072 659 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 HTR2CP28335 458 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 CD80P33681 288 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 TIMP3P35625 211 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 ELLP55199 621 aaPredicted RBP11.33□□□□□ -0.6
DDX55-206ENST00000539934 VMACQ2NL98 169 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 TCTN3Q6NUS6 607 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 GSG1LQ6UXU4 331 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 Q6ZSR6 202 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 GLCCI1Q86VQ1 547 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 CALHM3Q86XJ0 350 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 LAX1Q8IWV1 398 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 FAM58AQ8N1B3 248 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 C10orf111Q8N326 155 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 ZNF843Q8N446 348 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 CCL4L1Q8NHW4 92 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 M1APQ8TC57 530 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 PPCDCQ96CD2 204 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 MBOAT4Q96T53 435 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 TPPP3Q9BW30 176 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
DDX55-206ENST00000539934 M0R082 166 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 PLPP1O14494 284 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 TLX2O43763 284 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 SAP30O75446 220 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 EML2O95834 649 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 IL3P08700 152 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 FURINP09958 794 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 NFYAP23511 347 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 SHC1P29353 583 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 RAG2P55895 527 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 ZNF385BQ569K4 471 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 C9orf135Q5VTT2 229 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 SERPINA11Q86U17 422 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 EXD3Q8N9H8 876 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 GNPDA2Q8TDQ7 276 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 WSB2Q9NYS7 404 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 A4GNTQ9UNA3 340 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 EXO1Q9UQ84 846 aaKnown RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 SNX11Q9Y5W9 270 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 HS3ST3A1Q9Y663 406 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 ARHGEF17Q96PE2 2063 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 SMIM30A4D0T7 59 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 GJE1A6NN92 205 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 ISM1B1AKI9 464 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 EMC8O43402 210 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 SLC19A2O60779 497 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 TBX6O95947 436 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 CSTBP04080 98 aaKnown RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 RAP2AP10114 183 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 MAKP20794 623 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 SLC2A5P22732 501 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 GZMMP51124 257 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 RUNX2Q13950 521 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 KHDC3LQ587J8 217 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 GPR157Q5UAW9 335 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 KIAA0895LQ68EN5 471 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
DDX55-206ENST00000539934 FAM71E1Q6IPT2 247 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 TBPL2Q6SJ96 375 aa11.32□□□□□ -0.6
DDX55-206ENST00000539934 OR4E2Q8NGC2 313 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms