RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FTCDNL1E5RQL4 147 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 PLATP00750 562 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 GSTP1P09211 210 aaKnown RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 H2BFMP0C1H6 154 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 CD79AP11912 226 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 LRRC37A5PQ49AS3 106 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF542PQ5EBM4 170 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF529Q6P280 563 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 KLHL24Q6TFL4 600 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 HOGA1Q86XE5 327 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ACBD4Q8NC06 268 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 MFSD8Q8NHS3 518 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ASB10Q8WXI3 467 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ST8SIA1Q92185 356 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 KLHDC7BQ96G42 594 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 LRRC61Q9BV99 259 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 FANCFQ9NPI8 374 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 CUTCQ9NTM9 273 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 MMP17Q9ULZ9 603 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 FADS1O60427 444 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 LYL1P12980 280 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 HOXA1P49639 335 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 NR0B1P51843 470 aaKnown RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 C1orf61Q13536 156 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 STK11Q15831 433 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 POMZP3Q6PJE2 187 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 PAQR4Q8N4S7 273 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 CHST4Q8NCG5 386 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 OR1M1Q8NGA1 313 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 OR10R2Q8NGX6 335 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 MRGPRFQ96AM1 343 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ZDHHC12Q96GR4 267 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 WWTR1Q9GZV5 400 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ZMAT3Q9HA38 289 aaKnown RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 RAB18Q9NP72 206 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 MBD2Q9UBB5 411 aa11.84□□□□□ -0.51
UBE3B-209ENST00000539584 ZNF629Q9UEG4 869 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-209ENST00000539584 MPDZO75970 2070 aa11.83□□□□□ -0.51
UBE3B-209ENST00000539584 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 TMEM14DPA8MWL7 114 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 NPIPA5E9PKD4 350 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 SNAPINO95295 136 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 PET100P0DJ07 73 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 ABCD3P28288 659 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 HRH1P35367 487 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 CBX5P45973 191 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 DCDP81605 110 aaKnown RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 AIMP2Q13155 320 aaKnown RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 MICBQ29980 383 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 PLEKHN1Q494U1 663 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 FAM74A3Q4VXF1 159 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 RAB11FIP2Q7L804 512 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 GKN2Q86XP6 184 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 C9orf40Q8IXQ3 194 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 PRR22Q8IZ63 422 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 METTL27Q8N6F8 245 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-209ENST00000539584 OR1S2Q8NGQ3 325 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 OR1N1Q8NGS0 311 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 TERB2Q8NHR7 220 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 KLHDC3Q9BQ90 382 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 MMP26Q9NRE1 261 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 NPIPA1Q9UND3 350 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 PIAS3Q9Y6X2 628 aa11.83□□□□□ -0.52
UBE3B-209ENST00000539584 C5orf51A6NDU8 294 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 CCSO14618 274 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 PRKNO60260 465 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 VAMP1P23763 118 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 MAOBP27338 520 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 APOBEC1P41238 236 aaKnown RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 SLC6A9P48067 706 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 EIF3IQ13347 325 aaKnown RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 UNC119Q13432 240 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 NSUN5P2Q63ZY6 315 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 DHRS7BQ6IAN0 325 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 OR10K2Q6IF99 312 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 H1FNTQ75WM6 255 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 MDGA2Q7Z553 956 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 ZNF441Q8N8Z8 693 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 FGGYQ96C11 551 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 SAT2Q96F10 170 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-209ENST00000539584 FOXN4Q96NZ1 517 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 SEC11CQ9BY50 192 aa11.82□□□□□ -0.52
UBE3B-209ENST00000539584 FAM206AQ9NX38 181 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms