RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 DACT3Q96B18 629 aaPredicted RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 C7orf34Q96L11 122 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF582Q96NG8 517 aaPredicted RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 SLC30A2Q9BRI3 323 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 FUZQ9BT04 418 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 SSBP3Q9BWW4 388 aaPredicted RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 TMEM165Q9HC07 324 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 KRCC1Q9NPI7 259 aaPredicted RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 AURKCQ9UQB9 309 aa10.48□□□□□ -0.73
VAMP1-206ENST00000538970 FAM32AQ9Y421 112 aaKnown RBP10.48□□□□□ -0.73
VAMP1-206ENST00000538970 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 A0A1B0GWJ7 208 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 F5H5P2 479 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 DIRAS1O95057 198 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF205O95201 554 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 FSTL3O95633 263 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 PPP1R3DO95685 299 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 PPIAL4GP0DN37 164 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 IGHV4-38-2P0DP08 117 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 CENPAP49450 140 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 PSME3P61289 254 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 BAMBIQ13145 260 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 RSPO1Q2MKA7 263 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF404Q494X3 552 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 PRR31Q5SQ13 230 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 HIST2H2BDQ6DRA6 164 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 CORO6Q6QEF8 472 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 SMARCD3Q6STE5 483 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 COLCA1Q6ZS62 124 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 MOGAT3Q86VF5 341 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 BHLHE23Q8NDY6 225 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 SLC26A10Q8NG04 563 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 OR52E2Q8NGJ4 325 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 OR52J3Q8NH60 311 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 FANK1Q8TC84 345 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 UPRTQ96BW1 309 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ERMAPQ96PL5 475 aaPredicted RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 TMEM246Q9BRR3 403 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 WDR76Q9H967 626 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 DCAF13Q9NV06 445 aaKnown RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF446Q9NWS9 450 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 B9D1Q9UPM9 204 aa10.47□□□□□ -0.73
VAMP1-206ENST00000538970 SAMD4AQ9UPU9 718 aaKnown RBP10.47□□□□□ -0.73
VAMP1-206ENST00000538970 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 LRRC30A6NM36 301 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 CLDN34H7C241 214 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 PLATP00750 562 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 SELEP16581 610 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 GATA4P43694 442 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 GNB2P62879 340 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 DBPQ10586 325 aaPredicted RBP10.46□□□□□ -0.73
VAMP1-206ENST00000538970 GLYATQ6IB77 296 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 SLC18B1Q6NT16 456 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 LEG1Q6P5S2 330 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 BTNL3Q6UXE8 466 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 LRRN1Q6UXK5 716 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 JAZF1Q86VZ6 243 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 OR6V1Q8N148 313 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
VAMP1-206ENST00000538970 NMNAT3Q96T66 252 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 MS4A7Q9GZW8 240 aaPredicted RBP10.46□□□□□ -0.73
VAMP1-206ENST00000538970 OR52D1Q9H346 318 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 SPAG4Q9NPE6 437 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 MIOXQ9UGB7 285 aa10.46□□□□□ -0.73
VAMP1-206ENST00000538970 IGHV3OR16-10A0A075B7F0 116 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 ARPC3O15145 178 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SEMG1P04279 462 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 HLA-DPB1P04440 258 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 ACSM4P0C7M7 580 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 FPR3P25089 353 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SLC6A6P31641 620 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 MDH1P40925 334 aaKnown RBP10.45□□□□□ -0.74
VAMP1-206ENST00000538970 PMELP40967 661 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 PRSS12P56730 875 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
VAMP1-206ENST00000538970 KRT72Q14CN4 511 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SLC9A3R2Q15599 337 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 RFX4Q33E94 735 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 FAM201AQ5SY85 155 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 ZBTB46Q86UZ6 589 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 LINC00346Q8IVM7 164 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 C1orf87Q8N0U7 546 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 OR8B3Q8NGG8 313 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 OR4K13Q8NH42 304 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 SLC25A28Q96A46 364 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 PLEKHA8Q96JA3 519 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 OR8B2Q96RD0 313 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 ATF6BQ99941 703 aa10.45□□□□□ -0.74
VAMP1-206ENST00000538970 HCAR1Q9BXC0 346 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms