RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC2A1P11166 492 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 EPXP11678 715 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 SLC6A9P48067 706 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 DOC2BQ14184 412 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 LIPNQ5VXI9 398 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 TMPRSS11AQ6ZMR5 421 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 NAA40Q86UY6 237 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 NANOGP1Q8N7R0 232 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 PELI1Q96FA3 418 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 DOK1Q99704 481 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 MND1Q9BWT6 205 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 SNX5Q9Y5X3 404 aa20.35■□□□□ 0.85
TMEM260-202ENST00000538838 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.34■□□□□ 0.85
TMEM260-202ENST00000538838 CASKO14936 926 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 ANOS1P23352 680 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 PSMB10P40306 273 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 PSMA6P60900 246 aaKnown RBP20.34■□□□□ 0.85
TMEM260-202ENST00000538838 MFGE8Q08431 387 aaPredicted RBP20.34■□□□□ 0.85
TMEM260-202ENST00000538838 SPARTQ8N0X7 666 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 TSPAN14Q8NG11 270 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 OR1J2Q8NGS2 313 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 FAM222BQ8WU58 562 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 PLPPR2Q96GM1 343 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 MYCBPQ99417 103 aaPredicted RBP20.34■□□□□ 0.85
TMEM260-202ENST00000538838 BRD7Q9NPI1 651 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 GRIP1Q9Y3R0 1128 aa20.34■□□□□ 0.85
TMEM260-202ENST00000538838 MRPS14O60783 128 aaKnown RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 SRSF10O75494 262 aaKnown RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 MT-ND5P03915 603 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF35P13682 527 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 PTAFRP25105 342 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 WNT5AP41221 380 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 TPTEP56180 551 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF121P58317 390 aaPredicted RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 TBCEQ15813 527 aaPredicted RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 KCTD20Q7Z5Y7 419 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF485Q8NCK3 441 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 GATAD2BQ8WXI9 593 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 OR51B6Q9H340 312 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 ESRP2Q9H6T0 727 aaKnown RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 NIPAL2Q9H841 368 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 LSM2Q9Y333 95 aaKnown RBP20.33■□□□□ 0.84
TMEM260-202ENST00000538838 CADP27708 2225 aa20.33■□□□□ 0.84
TMEM260-202ENST00000538838 USP9YO00507 2555 aaPredicted RBP20.32■□□□□ 0.84
TMEM260-202ENST00000538838 ATP6V1G2-DDX39BF2Z307 99 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 ABCD4O14678 606 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 PNPP00491 289 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 RPSAP08865 295 aaKnown RBP20.32■□□□□ 0.84
TMEM260-202ENST00000538838 TACSTD2P09758 323 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 WNT4P56705 351 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF829Q3KNS6 432 aaPredicted RBP20.32■□□□□ 0.84
TMEM260-202ENST00000538838 BEX5Q5H9J7 111 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 NCMAPQ5T1S8 102 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 DRAM2Q6UX65 266 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 ZNF101Q8IZC7 436 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 RNF166Q96A37 237 aaPredicted RBP20.32■□□□□ 0.84
TMEM260-202ENST00000538838 OR5M11Q96RB7 305 aa20.32■□□□□ 0.84
TMEM260-202ENST00000538838 DEFB108AA8MXU0 73 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 E9PI62 339 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 CRYAAP02489 173 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 ANXA2P07355 339 aaKnown RBP20.31■□□□□ 0.84
TMEM260-202ENST00000538838 DCTDP32321 178 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 EMX1Q04741 257 aaPredicted RBP20.31■□□□□ 0.84
TMEM260-202ENST00000538838 KLBQ86Z14 1044 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
TMEM260-202ENST00000538838 SVOPQ8N4V2 548 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 IL17RDQ8NFM7 739 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 RORBQ92753 470 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 C4orf45Q96LM5 186 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 DCLRE1CQ96SD1 692 aaKnown RBP20.31■□□□□ 0.84
TMEM260-202ENST00000538838 KCNS3Q9BQ31 491 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 ACOT13Q9NPJ3 140 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 FAM206AQ9NX38 181 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 GTF2A1LQ9UNN4 478 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 N6AMT1Q9Y5N5 214 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 R4GMQ9 66 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 ICE1Q9Y2F5 2266 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 TMEM269A0A1B0GVZ9 245 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 C5orf63A6NC05 138 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 LALBAP00709 142 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 LCKP06239 509 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 FAM157BP0CG42 384 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 MED22Q15528 200 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 XAF1Q6GPH4 301 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 RFPL4BQ6ZWI9 263 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 FAM57BQ71RH2 274 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 PRSS45Q7RTY3 260 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 PIK3IP1Q96FE7 263 aa20.31■□□□□ 0.84
TMEM260-202ENST00000538838 HRNRQ86YZ3 2850 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-202ENST00000538838 LOC110117498-PIK3R3F6TDL0 507 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 APOC1P02654 83 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 LCATP04180 440 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 SMIM18P0DKX4 95 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 PCMT1P22061 227 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 GTF2A1P52655 376 aaPredicted RBP20.3■□□□□ 0.84
TMEM260-202ENST00000538838 ADAM5Q6NVV9 412 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 RADILQ96JH8 1075 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 HS3ST6Q96QI5 342 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 SPOCK3Q9BQ16 436 aa20.3■□□□□ 0.84
TMEM260-202ENST00000538838 C1QTNF5Q9BXJ0 243 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms