RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 B3GNTL1Q67FW5 361 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-204ENST00000538492 OR2AJ1Q8NGZ0 328 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 KLK13Q9UKR3 277 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 FREM2Q5SZK8 3169 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 TEX51A0A1B0GUA7 166 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 CYB5AP00167 134 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 CSN2P05814 226 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 ZNF43P17038 809 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 ESCO2Q56NI9 601 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 TMED4Q7Z7H5 227 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 COMMD2Q86X83 199 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 TMEM229BQ8NBD8 167 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 OR2AK2Q8NG84 335 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 OR4S1Q8NGB4 309 aa22.1■■□□□ 1.13
RAB40C-204ENST00000538492 PATE3B3GLJ2 98 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 ZNF35P13682 527 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 P2RX3P56373 397 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 OPCMLQ14982 345 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 OR1M1Q8NGA1 313 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 FOXRED1Q96CU9 486 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-204ENST00000538492 SOX7Q9BT81 388 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 SCPEP1Q9HB40 452 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 UBQLN2Q9UHD9 624 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 WIPF3A6NGB9 483 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 ANOS1P23352 680 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 NFYAP23511 347 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-204ENST00000538492 TAF13Q15543 124 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 C1QTNF12Q5T7M4 302 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 DCAF12L2Q5VW00 463 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 Q7L0L9 218 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 PAQR4Q8N4S7 273 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-204ENST00000538492 SPACA5Q96QH8 159 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 OPN4Q9UHM6 478 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 GPN3Q9UHW5 284 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-204ENST00000538492 SDK2Q58EX2 2172 aa22.09■■□□□ 1.13
RAB40C-204ENST00000538492 TNRC6BQ9UPQ9 1833 aaKnown RBP22.08■■□□□ 1.13
RAB40C-204ENST00000538492 ZNF736B4DX44 427 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-204ENST00000538492 SULT2B1O00204 365 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 RER1O15258 196 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 PDGFBP01127 241 aaPredicted RBP22.08■■□□□ 1.13
RAB40C-204ENST00000538492 QDPRP09417 244 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 FGF5P12034 268 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 UNC119Q13432 240 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 RNF144BQ7Z419 303 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 EDAQ92838 391 aa22.08■■□□□ 1.13
RAB40C-204ENST00000538492 ZNF878C9JN71 531 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 L7N2F9 121 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 ITGB2P05107 769 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 SCGB2B2Q4G0G5 96 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 FADS6Q8N9I5 356 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 CHST4Q8NCG5 386 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 ADPRHL1Q8NDY3 354 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 MR1Q95460 341 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 OXGR1Q96P68 337 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 CDX2Q99626 313 aaPredicted RBP22.08■■□□□ 1.12
RAB40C-204ENST00000538492 PRDM6Q9NQX0 595 aa22.08■■□□□ 1.12
RAB40C-204ENST00000538492 PTRH2Q9Y3E5 179 aaKnown RBP22.08■■□□□ 1.12
RAB40C-204ENST00000538492 LINC00862A6NCI5 91 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 TP53I11O14683 189 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 CCL4P13236 92 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 C11orf88Q6PI97 169 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 OR5D14Q8NGL3 314 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 PISDQ9UG56 409 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 METTL21EPA6NDL7 271 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 G3V3Y1 287 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 RAB27BO00194 218 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 ABOP16442 354 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 GABREP78334 506 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 DHODHQ02127 395 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 NKPD1Q17RQ9 610 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 SLC25A47Q6Q0C1 308 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 ABHD12BQ7Z5M8 362 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-204ENST00000538492 OR6X1Q8NH79 312 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 PTX4Q96A99 478 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 PNPLA2Q96AD5 504 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 RAB22AQ9UL26 194 aa22.07■■□□□ 1.12
RAB40C-204ENST00000538492 A0A0A6YYH2 397 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 A0A1B0GTI1 187 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 RPS10-NUDT3A0A1W2PQS6 291 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 TMEM82A0PJX8 343 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 A6NJ64 397 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 ZNF726A6NNF4 738 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 UMODP07911 640 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 RAB3AP20336 220 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 GFOD2Q3B7J2 385 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 SLC22A24Q8N4F4 322 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 SFXN2Q96NB2 322 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 MAB21L2Q9Y586 359 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 ARPC5O15511 151 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 IL11RAQ14626 422 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 CD163Q86VB7 1156 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 ZNF584Q8IVC4 421 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 BPIFB2Q8N4F0 458 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 GNRHR2Q96P88 292 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 WDR54Q9H977 334 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 ZNF319Q9P2F9 582 aa22.06■■□□□ 1.12
RAB40C-204ENST00000538492 IGHV1-45A0A0A0MS14 117 aa22.05■■□□□ 1.12
RAB40C-204ENST00000538492 AQP7P3A6NL99 342 aa22.05■■□□□ 1.12
RAB40C-204ENST00000538492 F5H5P2 479 aa22.05■■□□□ 1.12
RAB40C-204ENST00000538492 MASP2O00187 686 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms