RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DAOP14920 347 aa6□□□□□ -1.45
USP28-207ENST00000538475 RPS2P15880 293 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 PNLIPP16233 465 aa6□□□□□ -1.45
USP28-207ENST00000538475 HIST1H1TP22492 207 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 LMO1P25800 156 aa6□□□□□ -1.45
USP28-207ENST00000538475 CD52P31358 61 aa6□□□□□ -1.45
USP28-207ENST00000538475 SERPINF1P36955 418 aa6□□□□□ -1.45
USP28-207ENST00000538475 LPAR6P43657 344 aa6□□□□□ -1.45
USP28-207ENST00000538475 PRKAG1P54619 331 aa6□□□□□ -1.45
USP28-207ENST00000538475 CCL23P55773 120 aa6□□□□□ -1.45
USP28-207ENST00000538475 RPS15P62841 145 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 SMAD3P84022 425 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 LMAN2Q12907 356 aa6□□□□□ -1.45
USP28-207ENST00000538475 PLA2G7Q13093 441 aa6□□□□□ -1.45
USP28-207ENST00000538475 IL15RAQ13261 267 aa6□□□□□ -1.45
USP28-207ENST00000538475 PPP1R1AQ13522 171 aa6□□□□□ -1.45
USP28-207ENST00000538475 JOSD1Q15040 202 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 SURF2Q15527 256 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 UBE2V2Q15819 145 aa6□□□□□ -1.45
USP28-207ENST00000538475 GUK1Q16774 197 aa6□□□□□ -1.45
USP28-207ENST00000538475 FAM110CQ1W6H9 321 aa6□□□□□ -1.45
USP28-207ENST00000538475 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
USP28-207ENST00000538475 GPR157Q5UAW9 335 aa6□□□□□ -1.45
USP28-207ENST00000538475 HLA-DQA1Q5Y7H0 255 aa6□□□□□ -1.45
USP28-207ENST00000538475 FCRL6Q6DN72 434 aa6□□□□□ -1.45
USP28-207ENST00000538475 VITQ6UXI7 678 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZNF550Q7Z398 422 aa6□□□□□ -1.45
USP28-207ENST00000538475 SZRD1Q7Z422 152 aa6□□□□□ -1.45
USP28-207ENST00000538475 HSD11B1LQ7Z5J1 315 aa6□□□□□ -1.45
USP28-207ENST00000538475 ADGRE4PQ86SQ3 457 aa6□□□□□ -1.45
USP28-207ENST00000538475 BIVMQ86UB2 503 aa6□□□□□ -1.45
USP28-207ENST00000538475 HOGA1Q86XE5 327 aa6□□□□□ -1.45
USP28-207ENST00000538475 MEX3DQ86XN8 651 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 HIST3H2BBQ8N257 126 aa6□□□□□ -1.45
USP28-207ENST00000538475 TTC9BQ8N6N2 239 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZSCAN4Q8NAM6 433 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 NPEPL1Q8NDH3 523 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZNF740Q8NDX6 193 aa6□□□□□ -1.45
USP28-207ENST00000538475 OR2L5Q8NG80 312 aa6□□□□□ -1.45
USP28-207ENST00000538475 OR5T3Q8NGG3 340 aa6□□□□□ -1.45
USP28-207ENST00000538475 OR10G4Q8NGN3 311 aa6□□□□□ -1.45
USP28-207ENST00000538475 OR13C2Q8NGS9 318 aa6□□□□□ -1.45
USP28-207ENST00000538475 NUBPLQ8TB37 319 aa6□□□□□ -1.45
USP28-207ENST00000538475 ST7LQ8TDW4 575 aa6□□□□□ -1.45
USP28-207ENST00000538475 HPSE2Q8WWQ2 592 aa6□□□□□ -1.45
USP28-207ENST00000538475 AQP3Q92482 292 aa6□□□□□ -1.45
USP28-207ENST00000538475 ANKRD9Q96BM1 317 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 ANAPC16Q96DE5 110 aa6□□□□□ -1.45
USP28-207ENST00000538475 MUCL1Q96DR8 90 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZMYND19Q96E35 227 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 CNRIP1Q96F85 164 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 RRNAD1Q96FB5 475 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 RCC1LQ96I51 464 aaKnown RBP6□□□□□ -1.45
USP28-207ENST00000538475 SHDQ96IW2 340 aa6□□□□□ -1.45
USP28-207ENST00000538475 AKR1E2Q96JD6 320 aa6□□□□□ -1.45
USP28-207ENST00000538475 LMLNQ96KR4 655 aa6□□□□□ -1.45
USP28-207ENST00000538475 ZNF681Q96N22 645 aa6□□□□□ -1.45
USP28-207ENST00000538475 SDF2Q99470 211 aa6□□□□□ -1.45
USP28-207ENST00000538475 SLC6A7Q99884 636 aa6□□□□□ -1.45
USP28-207ENST00000538475 SCRT1Q9BWW7 348 aa6□□□□□ -1.45
USP28-207ENST00000538475 CST11Q9H112 138 aa6□□□□□ -1.45
USP28-207ENST00000538475 SYNPO2LQ9H987 977 aa6□□□□□ -1.45
USP28-207ENST00000538475 FN3KRPQ9HA64 309 aa6□□□□□ -1.45
USP28-207ENST00000538475 CAPN10Q9HC96 672 aa6□□□□□ -1.45
USP28-207ENST00000538475 PDE7BQ9NP56 450 aa6□□□□□ -1.45
USP28-207ENST00000538475 ADAP2Q9NPF8 381 aa6□□□□□ -1.45
USP28-207ENST00000538475 MKKSQ9NPJ1 570 aaPredicted RBP6□□□□□ -1.45
USP28-207ENST00000538475 DOK5Q9P104 306 aa6□□□□□ -1.45
USP28-207ENST00000538475 MSRAQ9UJ68 235 aa6□□□□□ -1.45
USP28-207ENST00000538475 PITPNC1Q9UKF7 332 aa6□□□□□ -1.45
USP28-207ENST00000538475 RAB22AQ9UL26 194 aa6□□□□□ -1.45
USP28-207ENST00000538475 ANAPC10Q9UM13 185 aa6□□□□□ -1.45
USP28-207ENST00000538475 VSIG4Q9Y279 399 aa6□□□□□ -1.45
USP28-207ENST00000538475 SMCO3A2RU48 225 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 CPED1A4D0V7 1026 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 TMEM202A6NGA9 273 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 GPR89AB7ZAQ6 455 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 UMAD1C9J7I0 102 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 FRS3O43559 492 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 OR10H2O60403 315 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 LRP3O75074 770 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 MTX2O75431 263 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 STK17BO94768 372 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 IFNA6P05013 189 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ERCC1P07992 297 aaPredicted RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 DANCRP0C864 163 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 GPR89BP0CG08 455 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 NDUFB7P17568 137 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 SDHBP21912 280 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 AQP2P41181 271 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 PDX1P52945 283 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 CLDN12P56749 244 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 NANOS3P60323 173 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 SKP1P63208 163 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 NKX6-1P78426 367 aaPredicted RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 PRDX1Q06830 199 aaKnown RBP5.99□□□□□ -1.45
USP28-207ENST00000538475 DPTQ07507 201 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 FHL1Q13642 323 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 ZNF750Q32MQ0 723 aa5.99□□□□□ -1.45
USP28-207ENST00000538475 TMEM176BQ3YBM2 270 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms