RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-210	ENST00000538318	COX10	Q12887	443 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	SEC23B	Q15437	767 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	MEP1B	Q16820	701 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	FGD3	Q5JSP0	725 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	KLB	Q86Z14	1044 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	PARP8	Q8N3A8	854 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	OR52E2	Q8NGJ4	325 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	C7orf34	Q96L11	122 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	TSSK2	Q96PF2	358 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	ABCD2	Q9UBJ2	740 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	POLR1D	Q9Y2S0	133 aa		13.99	□□□□□ -0.17
PTPN6-210	ENST00000538318	IGLV1-36	A0A0B4J1U3	117 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	UNC119B	A6NIH7	251 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318		F5H5P2	479 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	IGHV4-38-2	P0DP08	117 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	RPS2	P15880	293 aa	Known RBP	13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	SLC9A3R2	Q15599	337 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	KRTAP27-1	Q3LI81	207 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	DNM1P34	Q6PK57	102 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	SMARCD3	Q6STE5	483 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	BTNL3	Q6UXE8	466 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	COLCA1	Q6ZS62	124 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	RAB40A	Q8WXH6	277 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	SLC25A28	Q96A46	364 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	UPRT	Q96BW1	309 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	DHRS1	Q96LJ7	313 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	TMEM246	Q9BRR3	403 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	FUZ	Q9BT04	418 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	DCAF13	Q9NV06	445 aa	Known RBP	13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	B9D1	Q9UPM9	204 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	AURKC	Q9UQB9	309 aa		13.98	□□□□□ -0.17
PTPN6-210	ENST00000538318	IGHV2-70D	A0A0C4DH43	119 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	LRRC30	A6NM36	301 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	CCDC22	O60826	627 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	PPP1R3D	O95685	299 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	PLAT	P00750	562 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	PMEL	P40967	661 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	GATA4	P43694	442 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	MTNR1A	P48039	350 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	CENPA	P49450	140 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	NUDT2	P50583	147 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	GNB2	P62879	340 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	ZNF404	Q494X3	552 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	LEG1	Q6P5S2	330 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	CORO6	Q6QEF8	472 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	MOGAT3	Q86VF5	341 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	C1orf87	Q8N0U7	546 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	OR6V1	Q8N148	313 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	BHLHE23	Q8NDY6	225 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	OR52J3	Q8NH60	311 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	NEIL1	Q96FI4	390 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	PLEKHA8	Q96JA3	519 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	ERMAP	Q96PL5	475 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	TMEM100	Q9NV29	134 aa		13.97	□□□□□ -0.17
PTPN6-210	ENST00000538318	IGHV3-64D	A0A0J9YX35	117 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	KIR2DS1	A0A191URI9	304 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	ARPC3	O15145	178 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	DIRAS1	O95057	198 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	HLA-DPB1	P04440	258 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	SELE	P16581	610 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	IL13RA1	P78552	427 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	MAB21L1	Q13394	359 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	RFX4	Q33E94	735 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	GLYAT	Q6IB77	296 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	FAM86B1	Q8N7N1	296 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	CELF2-AS1	Q8N7Q2	184 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	SLC26A10	Q8NG04	563 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318		Q8TCH9	128 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	NMNAT3	Q96T66	252 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	HCAR1	Q9BXC0	346 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	WDR76	Q9H967	626 aa		13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	UNKL	Q9H9P5	680 aa	Known RBP	13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	SRA1	Q9HD15	236 aa	Known RBP	13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	SAMD4A	Q9UPU9	718 aa	Known RBP	13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	SOX21	Q9Y651	276 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN6-210	ENST00000538318	IGHV3OR16-10	A0A075B7F0	116 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	POM121C	A8CG34	1229 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	ACSM4	P0C7M7	580 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	FPR3	P25089	353 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	MDH1	P40925	334 aa	Known RBP	13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	PITPNB	P48739	271 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	PSME3	P61289	254 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	ECH1	Q13011	328 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	GK2	Q14410	553 aa	Predicted RBP	13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	FAM201A	Q5SY85	155 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	SLC18B1	Q6NT16	456 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	CFAP77	Q6ZQR2	320 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	NLRC3	Q7RTR2	1065 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	ZBTB46	Q86UZ6	589 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	OR8B3	Q8NGG8	313 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	ERGIC1	Q969X5	290 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	OR8B2	Q96RD0	313 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	OR52D1	Q9H346	318 aa		13.95	□□□□□ -0.18
PTPN6-210	ENST00000538318	TRAV40	A0A0B4J280	105 aa		13.94	□□□□□ -0.18
PTPN6-210	ENST00000538318		F5H5K5	113 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms