RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 LRRC75A-AS1Q8N1F1 130 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 PQLC1Q8N2U9 271 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 GPR32P1Q8NGA4 272 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 MAFIPQ8WZ33 124 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 C11orf40Q8WZ69 217 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TECTBQ96PL2 329 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF385AQ96PM9 386 aaKnown RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 FOXB1Q99853 325 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TSSK6Q9BXA6 273 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 CADM1Q9BY67 442 aaKnown RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 YTHDF1Q9BYJ9 559 aaKnown RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 AMBRA1Q9C0C7 1298 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TSPAN10Q9H1Z9 355 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ANKRA2Q9H9E1 313 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 MAN2C1Q9NTJ4 1040 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 SDHAF2Q9NX18 166 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 BABAM2Q9NXR7 383 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF224Q9NZL3 707 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 JKAMPQ9P055 326 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 A4GNTQ9UNA3 340 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 NTNG1Q9Y2I2 539 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 SPTA1P02549 2419 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 HSPA12AO43301 675 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 GMFGO60234 142 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 H2AFB2P0C5Z0 115 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF133P52736 654 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 BIDP55957 195 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 HIKESHIQ53FT3 197 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 KLHL12Q53G59 568 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ATAD3CQ5T2N8 411 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 LPCAT4Q643R3 524 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 SLC18B1Q6NT16 456 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 CYP2R1Q6VVX0 501 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ZAR1Q86SH2 424 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 PEG10Q86TG7 708 aaKnown RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM99Q8N816 258 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 C9orf106Q8NAJ2 232 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 AQP11Q8NBQ7 271 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 NEU4Q8WWR8 484 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM54Q969K7 222 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 MUS81Q96NY9 551 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 ERMAPQ96PL5 475 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 HIST1H2AAQ96QV6 131 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 OR52D1Q9H346 318 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 NELFAQ9H3P2 528 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 MS4A5Q9H3V2 200 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 TMEM185BQ9H7F4 350 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 FLRT3Q9NZU0 649 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 SLAMF8Q9P0V8 285 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 RPL36Q9Y3U8 105 aaKnown RBP3.16□□□□□ -1.9
PTPN22-211ENST00000538253 CMAHPQ9Y471 501 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 LYVE1Q9Y5Y7 322 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 FAM208BQ5VWN6 2430 aa3.16□□□□□ -1.9
PTPN22-211ENST00000538253 SCN2AQ99250 2005 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 COL6A6A6NMZ7 2263 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A087WUU8 490 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A087X0M5 115 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A0G2JMM0 328 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A0G2JNJ9 132 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1B0GX30 115 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1W2PNR3 127 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1W2PPB8 328 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 A0A1W2PRS3 328 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ISPDA4D126 451 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 PRSS37A4D1T9 235 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 C2orf72A6NCS6 295 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RFPL4AA6NLU0 287 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF716A6NP11 495 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 KIR3DP1A8MWS1 328 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RFPL4AL1F8VTS6 287 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ARPC5O15511 151 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 TBX1O43435 398 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 XRCC2O43543 280 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ATE1O95260 518 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 FADS2O95864 444 aaKnown RBP3.15□□□□□ -1.9
PTPN22-211ENST00000538253 HLA-DQA2P01906 255 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RD3LP0DJH9 198 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 POU1F1P28069 291 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 DCTDP32321 178 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 SOX18P35713 384 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 TGFBR2P37173 567 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 CRISP1P54107 249 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 CLDN20P56880 219 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 FOXL2P58012 376 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RAB35Q15286 201 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 TRIP10Q15642 601 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 SNAPC1Q16533 368 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 GSG1Q2KHT4 349 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 EXOC3L2Q2M3D2 409 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 PGGHGQ32M88 737 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ZNF718Q3SXZ3 478 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 ZFP69Q49AA0 526 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 RNFT1Q5M7Z0 435 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 FAM27BQ5VT28 67 aa3.15□□□□□ -1.9
PTPN22-211ENST00000538253 SP5Q6BEB4 398 aaPredicted RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms