RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SHQ1Q6PI26 577 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 COMMD6Q7Z4G1 85 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SPATA19Q7Z5L4 167 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 METTL4Q8N3J2 472 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 FAM89BQ8N5H3 189 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 C22orf15Q8WYQ4 148 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 CPNE4Q96A23 557 aaPredicted RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SH3YL1Q96HL8 342 aaPredicted RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SOSTQ9BQB4 213 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 TBL1XR1Q9BZK7 514 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 CDC42EP4Q9H3Q1 356 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 TSPY26PQ9H489 355 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 RHOJQ9H4E5 214 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 NARFLQ9H6Q4 476 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 EGLN3Q9H6Z9 239 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 POPDC3Q9HBV1 291 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 MYOZ1Q9NP98 299 aaPredicted RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 PFDN4Q9NQP4 134 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SDHAF3Q9NRP4 125 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 CHCHD3Q9NX63 227 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 RNF14Q9UBS8 474 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 MOKQ9UQ07 419 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 WIPI2Q9Y4P8 454 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 PPIAL4AQ9Y536 164 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF780BQ9Y6R6 833 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 CCT8L1PA6NM43 557 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 OR7A17O14581 309 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PLOD3O60568 738 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 KERAO60938 352 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 BCAS2O75934 225 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PSMG1O95456 288 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 OXSR1O95747 527 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 MSMBP08118 114 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 NUDT17P0C025 328 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PCMT1P22061 227 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 ME2P23368 584 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 IDH3GP51553 393 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PSPHP78330 225 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 DLK1P80370 383 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PAX8Q06710 450 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 C17orf67Q0P5P2 114 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 CD226Q15762 336 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 FAM189A2Q15884 450 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 GABRA6Q16445 453 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 TMEM176BQ3YBM2 270 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 C9orf135Q5VTT2 229 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 CST9LP1Q5W188 147 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 FAHD2BQ6P2I3 314 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 GDPGP1Q6ZNW5 385 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 SSX8Q7RTT4 187 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 GOLGA7Q7Z5G4 137 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 SPAG16Q8N0X2 631 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 ATP6V1C2Q8NEY4 427 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 CLDND2Q8NHS1 167 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 ZFP90Q8TF47 636 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 MAIP1Q8WWC4 291 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 MAGOHBQ96A72 148 aaKnown RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 EXOSC8Q96B26 276 aaKnown RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 ERP27Q96DN0 273 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 FAHD2AQ96GK7 314 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 MS4A14Q96JA4 679 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 C1orf147Q96MC9 270 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 SERPINI1Q99574 410 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 NAT9Q9BTE0 207 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 SUCNR1Q9BXA5 334 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 TXLNGYQ9BZA5 131 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 B3GAT2Q9NPZ5 323 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 CA10Q9NS85 328 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 FARSBQ9NSD9 589 aaKnown RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 MED29Q9NX70 200 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 PDP1Q9P0J1 537 aaPredicted RBP4.24□□□□□ -1.73
CLIP1-207ENST00000536634 GUCA1BQ9UMX6 200 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 TEX264Q9Y6I9 313 aa4.24□□□□□ -1.73
CLIP1-207ENST00000536634 IGHV1-18A0A0C4DH31 117 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 CIB4A0PJX0 185 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF724A8MTY0 619 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 NPIPB9F8W1W9 429 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PDLIM1O00151 329 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 UPK1AO00322 258 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 DNALI1O14645 258 aaPredicted RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 CYTIPO60759 359 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PDE5AO76074 875 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 H6PDO95479 791 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PNPP00491 289 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 IL3P08700 152 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 OR4A8P0C604 315 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PPOXP50336 477 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF41P51814 821 aaPredicted RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 RAB10P61026 200 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 IL1RL1Q01638 556 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 MZT1Q08AG7 82 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 ILF2Q12905 390 aaKnown RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TRADDQ15628 312 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TOMM34Q15785 309 aaPredicted RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 FBXW9Q5XUX1 488 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 CCDC137Q6PK04 289 aaKnown RBP4.23□□□□□ -1.73
CLIP1-207ENST00000536634 TMEM107Q6UX40 140 aa4.23□□□□□ -1.73
CLIP1-207ENST00000536634 PAGE2Q7Z2X7 111 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms