RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PITX2Q99697 317 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CMKLR1Q99788 373 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 KXD1Q9BQD3 176 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ALKBH7Q9BT30 221 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 CABLES2Q9BTV7 478 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CDCA4Q9BXL8 241 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TBL1XR1Q9BZK7 514 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 TLNRD1Q9H1K6 362 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C20orf85Q9H1P6 137 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ABCG5Q9H222 651 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 SYT4Q9H2B2 425 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 UBQLN3Q9H347 655 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PRO1933Q9H354 126 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ST6GALNAC4Q9H4F1 302 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 LMAN1LQ9HAT1 526 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 IL1RL2Q9HB29 575 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 LPAR2Q9HBW0 351 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 NOX3Q9HBY0 568 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 SLC2A9Q9NRM0 540 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 UBQLN4Q9NRR5 601 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 HEBP1Q9NRV9 189 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 CENPMQ9NSP4 180 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C2orf42Q9NWW7 574 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 RCC2Q9P258 522 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 KLHL8Q9P2G9 620 aaPredicted RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 PEF1Q9UBV8 284 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 OR14J1Q9UGF5 321 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PADI1Q9ULC6 663 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 UBQLN1Q9UMX0 589 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 SAMD4AQ9UPU9 718 aaKnown RBP2.19□□□□□ -2.06
SKA3-207ENST00000536239 ANGPT4Q9Y264 503 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 BTRCQ9Y297 605 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 KPTNQ9Y664 436 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 POMT1Q9Y6A1 747 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 PLIN4Q96Q06 1357 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 ARAP2Q8WZ64 1704 aa2.19□□□□□ -2.06
SKA3-207ENST00000536239 C5P01031 1676 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SIPA1L3O60292 1781 aaPredicted RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 TNS3Q68CZ2 1445 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 TJP1Q07157 1748 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 QSER1Q2KHR3 1735 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 TRAV39A0A0B4J263 110 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 A0A1B0GUH1 482 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 LOC285095A0A1B0GVY8 99 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 A0A1W2PPH5 198 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 OR2M5A3KFT3 312 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MGAT4DA6NG13 374 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 A6NLC8 198 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF726A6NNF4 738 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF724A8MTY0 619 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SNRPGP15A8MWD9 76 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SUPT3HB4E1H0 165 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 E9PQ18 207 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 G3V2L1 256 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 APOC4-APOC2K7ER74 178 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 K7ERU9 68 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MFNGO00587 321 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 UBFD1O14562 309 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 CLIC2O15247 247 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF264O43296 627 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 FGF16O43320 207 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SYT7O43581 403 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SOX15O60248 233 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 NME2P1O60361 137 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 MPZL2O60487 215 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 EIF4E2O60573 245 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 RAMP3O60896 148 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 WDR1O75083 606 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CA11O75493 328 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 PRDM1O75626 825 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ANXA9O76027 345 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 OR4F21O95013 312 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 YIF1AO95070 293 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 TNFSF15O95150 251 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 AIFM1O95831 613 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 NDUFB10O96000 172 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CST1P01037 141 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CSTBP04080 98 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 SFTPBP07988 381 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CST2P09228 141 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 UQCRFS1P1P0C7P4 283 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CSH1P0DML2 217 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CSH2P0DML3 217 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CD79AP11912 226 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 CCL2P13500 99 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ZNF35P13682 527 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 GTF2F2P13984 249 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 IRF2P14316 349 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ETS1P14921 441 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 KCNE1P15382 129 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SRD5A1P18405 259 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 ADCYAP1P18509 176 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 SERPINA2P20848 420 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 HNRNPA2B1P22626 353 aaKnown RBP2.18□□□□□ -2.06
SKA3-207ENST00000536239 ACKR3P25106 362 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 GABRR2P28476 465 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 IL2RGP31785 369 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 BRS3P32247 399 aa2.18□□□□□ -2.06
SKA3-207ENST00000536239 AKR1C3P42330 323 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms