RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 OTOSQ8NHW6 89 aa16.09■□□□□ 0.17
RAB40C-203ENST00000535977 CLCC1Q96S66 551 aa16.09■□□□□ 0.17
RAB40C-203ENST00000535977 EDEM2Q9BV94 578 aa16.09■□□□□ 0.17
RAB40C-203ENST00000535977 PHF7Q9BWX1 381 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-203ENST00000535977 FAM96BQ9Y3D0 163 aa16.09■□□□□ 0.17
RAB40C-203ENST00000535977 NUP210LQ5VU65 1888 aa16.08■□□□□ 0.17
RAB40C-203ENST00000535977 MUC3AQ02505 3323 aa16.08■□□□□ 0.17
RAB40C-203ENST00000535977 MPDZO75970 2070 aa16.08■□□□□ 0.17
RAB40C-203ENST00000535977 IGHV1OR21-1A0A087WYE8 117 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 TVP23AA6NH52 213 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 F5H0A9 414 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-203ENST00000535977 TAS2R20P59543 309 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 UNQ6126/PRO20091Q6UXV3 157 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ETV3LQ6ZN32 361 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 DPY19L4Q7Z388 723 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 MARCH3Q86UD3 253 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ZNF227Q86WZ6 799 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 C9orf40Q8IXQ3 194 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 PRR22Q8IZ63 422 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ZNF561Q8N587 486 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 C15orf54Q8N8G6 183 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ASB13Q8WXK3 278 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 SYT4Q9H2B2 425 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 SMCO4Q9NRQ5 59 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 C4orf47A7E2U8 309 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 NUDT14O95848 222 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 IGHV2-5P01817 119 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 DLSTP36957 453 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 CXADRP78310 365 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ZP2Q05996 745 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 GFOD2Q3B7J2 385 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 AKIRIN2Q53H80 203 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 KRT77Q7Z794 578 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 OR1L3Q8NH93 324 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 RHOVQ96L33 236 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 APMAPQ9HDC9 416 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 STEAP1Q9UHE8 339 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 TRIOO75962 3097 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 KNL1Q8NG31 2342 aa16.08■□□□□ 0.16
RAB40C-203ENST00000535977 ARGFXA6NJG6 315 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 A8MVM7 634 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 DXOO77932 396 aaKnown RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 ZNF14P17017 642 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 FAUP35544 74 aaKnown RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 SMAD4Q13485 552 aaKnown RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 TAF13Q15543 124 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 CDNFQ49AH0 187 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 SSX9Q7RTT3 188 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 ZNF524Q96C55 264 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 TXNIPQ9H3M7 391 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 ATXN7L1Q9ULK2 861 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 COL5A1P20908 1838 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 PRSS37A4D1T9 235 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 OR2AT4A6NND4 320 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 PIAS2O75928 621 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 CD79AP11912 226 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 RCC1P18754 421 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 TEX30Q5JUR7 227 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 OR52W1Q6IF63 320 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 SLC18B1Q6NT16 456 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 DNM1P46Q6ZS02 220 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 GRINAQ7Z429 371 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 TMEM200AQ86VY9 491 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 PLPP5Q8NEB5 264 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 OR51S1Q8NGJ8 323 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 OR6N1Q8NGY5 312 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 SLC41A2Q96JW4 573 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 OR8B4Q96RC9 309 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 VSX1Q9NZR4 365 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 RCC2Q9P258 522 aaKnown RBP16.07■□□□□ 0.16
RAB40C-203ENST00000535977 ASH2LQ9UBL3 628 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 B9D1Q9UPM9 204 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 EML5Q05BV3 1969 aa16.07■□□□□ 0.16
RAB40C-203ENST00000535977 TMED7-TICAM2A0A0A6YYA0 188 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 A0A1B0GX78 115 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 MBTPS2O43462 519 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 NPIPB7O75200 414 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 OR6A2O95222 327 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 CD8AP01732 235 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 IGHMP01871 453 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 SOX2P48431 317 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 F2RL1P55085 397 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 OR1D5P58170 312 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 ARHGAP40Q5TG30 622 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 ZNF441Q8N8Z8 693 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 STEAP2Q8NFT2 490 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 MCHR2Q969V1 340 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 C14orf144Q96I85 54 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 C4orf45Q96LM5 186 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 NRIP2Q9BQI9 281 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 RTN4RQ9BZR6 473 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 TMPRSS5Q9H3S3 457 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 EXO5Q9H790 373 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 TMED7Q9Y3B3 224 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 H7C1C5 153 aa16.06■□□□□ 0.16
RAB40C-203ENST00000535977 TMIGD3P0DMS9 266 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-203ENST00000535977 ADRA2CP18825 462 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms