RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 CMPK2Q5EBM0 449 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 MRPS24Q96EL2 167 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 MED29Q9NX70 200 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 DAPP1Q9UN19 280 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 TAF1P21675 1872 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 C4AP0C0L4 1744 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 CRYBA1P05813 215 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
SPG11-203ENST00000535302 HSF1Q00613 529 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 RHOXF1Q8NHV9 184 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 TMEM43Q9BTV4 400 aa11.5□□□□□ -0.57
SPG11-203ENST00000535302 H3BP45 60 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 BMPR1BO00238 502 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 GLCEO94923 617 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 HBE1P02100 147 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TNFRSF12AQ9NP84 129 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 FLVCR2Q9UPI3 526 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 LOC100289279A0A1B0GTE1 492 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TO15178 435 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 HYAL3O43820 417 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 FCMRO60667 390 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 RBP4P02753 201 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CD14P08571 375 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CT45A10P0DMU9 189 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CPEP16870 476 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CR2P20023 1033 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TCTAP57738 103 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TMEM200AQ86VY9 491 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 KDF1Q8NAX2 398 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 MMP17Q9ULZ9 603 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 LOC102723971A0A1B0GUV8 181 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CDC14BO60729 498 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 ELK1P19419 428 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 FPR3P25089 353 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 ZMAT1Q5H9K5 638 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 CAMKMTQ7Z624 323 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 MZB1Q8WU39 189 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 ZNF701M0R085 212 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 CDAP32320 146 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 ST8SIA4Q92187 359 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TIMD4Q96H15 378 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 TIMM9Q9Y5J7 89 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 OLFM2O95897 454 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 EXT1Q16394 746 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 OTUD1Q5VV17 481 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 SAXO2Q658L1 398 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 C17orf107Q6ZR85 190 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 PHF7Q9BWX1 381 aaPredicted RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
SPG11-203ENST00000535302 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
SPG11-203ENST00000535302 HMX2A2RU54 273 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 ACOT8O14734 319 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 SLC19A1P41440 591 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 RAP2BP61225 183 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 BTNL8Q6UX41 500 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 LGI3Q8N145 548 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 MISP3Q96FF7 219 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 TCRBP04435 133 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 RPS19P39019 145 aaKnown RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 CLVS2Q5SYC1 327 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 TGIF2LYQ8IUE0 185 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 CA13Q8N1Q1 262 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 RNF141Q8WVD5 230 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 C11orf40Q8WZ69 217 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 SDF2Q99470 211 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 NT5DC2Q9H857 520 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 ASH2LQ9UBL3 628 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 NAGAP17050 411 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 PSMB1P20618 241 aaKnown RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 KIR2DL3P43628 341 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 MTNR1BP49286 362 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 ISL2Q96A47 359 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 SPRY1O43609 319 aaPredicted RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 FABP4P15090 132 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 HTRA4P83105 476 aaPredicted RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 PRDX4Q13162 271 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 AFMIDQ63HM1 303 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 TMPRSS13Q9BYE2 586 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 F5H697 171 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 EIF1P41567 113 aaKnown RBP11.48□□□□□ -0.57
SPG11-203ENST00000535302 ACSM5Q6NUN0 579 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 DLEU7Q6UYE1 221 aa11.48□□□□□ -0.57
SPG11-203ENST00000535302 ADGRE4PQ86SQ3 457 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms