RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 GLRA3O75311 464 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 SLC2A10O95528 541 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 GYPAP02724 150 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 ALDOBP05062 364 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 G6PDP11413 515 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 TUBG1P23258 451 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 HTR2AP28223 471 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 DNAJB13P59910 316 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 CNN3Q15417 329 aaKnown RBP5.19□□□□□ -1.58
CD44-237ENST00000534082 OR8B8Q15620 311 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 MAPK11Q15759 364 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 SGCAQ16586 387 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 HIST3H3Q16695 136 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 PDCD4Q53EL6 469 aaKnown RBP5.19□□□□□ -1.58
CD44-237ENST00000534082 C6orf136Q5SQH8 315 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 C10orf128Q5T292 105 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 INTS11Q5TA45 600 aaKnown RBP5.19□□□□□ -1.58
CD44-237ENST00000534082 PRAMEF6Q5VXH4 476 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 NCR3LG1Q68D85 454 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 OR2T2Q6IF00 324 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 KCTD18Q6PI47 426 aaPredicted RBP5.19□□□□□ -1.58
CD44-237ENST00000534082 FGFRL1Q8N441 504 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 LY6G5BQ8NDX9 201 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 BHLHE23Q8NDY6 225 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 OR8G5Q8NG78 346 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 OR8J2Q8NGG1 315 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 TNFRSF14Q92956 283 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 CCDC115Q96NT0 180 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 FUT8Q9BYC5 575 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 ARMC7Q9H6L4 198 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 ZMAT4Q9H898 229 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 EDA2RQ9HAV5 297 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 CACYBPQ9HB71 228 aaKnown RBP5.19□□□□□ -1.58
CD44-237ENST00000534082 TRIM36Q9NQ86 728 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 NANSQ9NR45 359 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 TUBG2Q9NRH3 451 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 UFSP2Q9NUQ7 469 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 P2RX2Q9UBL9 471 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 STARD10Q9Y365 291 aa5.19□□□□□ -1.58
CD44-237ENST00000534082 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 TRAV38-1A0A0B4J264 116 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 PRSS51A0A1B0GVH4 220 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 OOEPA6NGQ2 149 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 F2RL2O00254 374 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 RNF13O43567 381 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 NDUFA2O43678 99 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 MT-ATP6P00846 226 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 HLA-DPB1P04440 258 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 BCHEP06276 602 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 DUX4L4P0CJ87 422 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 PAICSP22234 425 aaKnown RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 ZNF133P52736 654 aaPredicted RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 CRISP3P54108 245 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 RAD23AP54725 363 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 CLDN8P56748 225 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 TXNL4AP83876 142 aaKnown RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 MPPED2Q15777 294 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ANXA8L1Q5VT79 327 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 FAM91A1Q658Y4 838 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ULK3Q6PHR2 472 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 TIFABQ6ZNK6 161 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 TMEM219Q86XT9 240 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 CLDN22Q8N7P3 220 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 LSMEM1Q8N8F7 131 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 OR4X2Q8NGF9 303 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 PIFOQ8TCI5 191 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 DNAJA4Q8WW22 397 aaPredicted RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 PTP4A1Q93096 173 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 SLC35B4Q969S0 331 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ERGIC1Q969X5 290 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 AJUBAQ96IF1 538 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 Q96M66 194 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 COG8Q96MW5 612 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ZNF583Q96ND8 569 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ZNF582Q96NG8 517 aaPredicted RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 SEPHS2Q99611 448 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ECSITQ9BQ95 431 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 ZNF649Q9BS31 505 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 PTTG3PQ9NZH4 202 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 CALML5Q9NZT1 146 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 RNF7Q9UBF6 113 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 UTP11Q9Y3A2 253 aaKnown RBP5.18□□□□□ -1.58
CD44-237ENST00000534082 TIMM10BQ9Y5J6 103 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 SMAD5-AS1Q9Y6J3 95 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
CD44-237ENST00000534082 IGKV1D-43A0A0B4J1Z2 117 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 A0A1B0GWJ7 208 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 MCIDASD6RGH6 385 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 SERPINE1P05121 402 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 CST2P09228 141 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 ETFAP13804 333 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 FPR3P25089 353 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 LAP3P28838 519 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 CD200P41217 278 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 ECI1P42126 302 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 PAFAH1B1P43034 410 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 THBS3P49746 956 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 LUMP51884 338 aaPredicted RBP5.17□□□□□ -1.58
CD44-237ENST00000534082 PCBD1P61457 104 aa5.17□□□□□ -1.58
CD44-237ENST00000534082 IL5RAQ01344 420 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms