RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PRORSD1PA6NEY8 169 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 IQCF6A8MYZ5 107 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 LCE2BO14633 110 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 SGCEO43556 437 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L2P0CJ85 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L3P0CJ86 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L4P0CJ87 422 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L5P0CJ88 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L6P0CJ89 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L7P0CJ90 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 MSR1P21757 451 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 MSX2P35548 267 aaPredicted RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 POU4F2Q12837 409 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4L9Q6RFH8 374 aaPredicted RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 HDDC2Q7Z4H3 204 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 NKAIN4Q8IVV8 208 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 BOLLQ8N9W6 283 aaKnown RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 OR4S1Q8NGB4 309 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 ZNF582Q96NG8 517 aaPredicted RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 ALG12Q9BV10 488 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 WDR76Q9H967 626 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 SIRT7Q9NRC8 400 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 SDR39U1Q9NRG7 319 aaPredicted RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 GAR1Q9NY12 217 aaKnown RBP10.04□□□□□ -0.8
SVIP-205ENST00000533774 ZIM2Q9NZV7 527 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 VAPAQ9P0L0 249 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 DUX4Q9UBX2 424 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 SLC13A4Q9UKG4 626 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 STAB2Q8WWQ8 2551 aa10.04□□□□□ -0.8
SVIP-205ENST00000533774 ELOVL7A1L3X0 281 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 OR6C6A6NF89 314 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 NPIPB13A6NJU9 1138 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 C12orf71A8MTZ7 269 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 NPIPB4C9JG80 1138 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 H3BUX3 64 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 H7C1C5 153 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 LGALS8O00214 317 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 DVL1O14640 695 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 NPFFO15130 113 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 HDAC3O15379 428 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 BIRC5O15392 142 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 GYPAP02724 150 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 MT-ND1P03886 318 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 IDO1P14902 403 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 FPR3P25089 353 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 PAX6P26367 422 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 LCN6P62502 163 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 MPP2Q14168 576 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 LY6EQ16553 131 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 CDONQ4KMG0 1287 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 LRIF1Q5T3J3 769 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 METAP1DQ6UB28 335 aaPredicted RBP10.03□□□□□ -0.8
SVIP-205ENST00000533774 Q8N7P7 452 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 GOLGA6L1Q8N7Z2 621 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 OR5R1Q8NH85 324 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
SVIP-205ENST00000533774 TMEM255BQ8WV15 326 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 MPP4Q96JB8 637 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
SVIP-205ENST00000533774 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 TMEM38AQ9H6F2 299 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 CNTD2Q9H8S5 307 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 GMPR2Q9P2T1 348 aaKnown RBP10.03□□□□□ -0.8
SVIP-205ENST00000533774 RPUSD1Q9UJJ7 312 aaKnown RBP10.03□□□□□ -0.8
SVIP-205ENST00000533774 KPTNQ9Y664 436 aa10.03□□□□□ -0.8
SVIP-205ENST00000533774 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 FBP2O00757 339 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 CHST1O43916 411 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 FBXO24O75426 580 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 SERPINB7O75635 380 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 IRF2P14316 349 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 CD247P20963 164 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 SAA4P35542 130 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 CD200P41217 278 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 RPL27P61353 136 aaKnown RBP10.02□□□□□ -0.81
SVIP-205ENST00000533774 CD69Q07108 199 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 STX3Q13277 289 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 HABP2Q14520 560 aaPredicted RBP10.02□□□□□ -0.81
SVIP-205ENST00000533774 CCDC92Q53HC0 331 aaPredicted RBP10.02□□□□□ -0.81
SVIP-205ENST00000533774 PAGE3Q5JUK9 113 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 PGBD2Q6P3X8 592 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 MAVSQ7Z434 540 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 PCYOX1LQ8NBM8 494 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 LY6G5BQ8NDX9 201 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 NPRL2Q8WTW4 380 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 LIPHQ8WWY8 451 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 RORBQ92753 470 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 TNFRSF14Q92956 283 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 SGTBQ96EQ0 304 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 RBP7Q96R05 134 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 EVA1AQ9H8M9 152 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 SERTAD4Q9NUC0 356 aa10.02□□□□□ -0.81
SVIP-205ENST00000533774 TMEM100Q9NV29 134 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms