RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 PIGTQ969N2 578 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 MRPL24Q96A35 216 aaKnown RBP14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 APOBEC3DQ96AK3 386 aaPredicted RBP14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 ZNF799Q96GE5 643 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 TRAF4Q9BUZ4 470 aaPredicted RBP14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 NIPAL2Q9H841 368 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 CBLN4Q9NTU7 201 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 COPS3Q9UNS2 423 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 PCDHGB1Q9Y5G3 927 aa14.16□□□□□ -0.14
PACSIN3-210ENST00000533686 SPG11Q96JI7 2443 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 B9A039 149 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 J3QRE1 110 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 ZNF254O75437 659 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 CD8AP01732 235 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 LCKP06239 509 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 H2BFMP0C1H6 154 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 DBTP11182 482 aaKnown RBP14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 ZNF250P15622 560 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 PPP1CBP62140 327 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 ZNF91Q05481 1191 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 EGR3Q06889 387 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 CDK5R2Q13319 367 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 SWI5Q1ZZU3 235 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 MST1LQ2TV78 715 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 RFPL4BQ6ZWI9 263 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 SPATC1Q76KD6 591 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 OR5L1Q8NGL2 311 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 CNIH3Q8TBE1 160 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 MARS2Q96GW9 593 aaKnown RBP14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 CCL19Q99731 98 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 OR51B6Q9H340 312 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 FBXO9Q9UK97 447 aaPredicted RBP14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 LAMP3Q9UQV4 416 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 ITPR2Q14571 2701 aa14.15□□□□□ -0.14
PACSIN3-210ENST00000533686 DNASE1P24855 282 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 HSD11B1P28845 292 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 DCTDP32321 178 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 PRKXP51817 358 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 SELENOVP59797 346 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 CXCR4P61073 352 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ACTC1P68032 377 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ACTA1P68133 377 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 RAB40BQ12829 278 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 MSMPQ1L6U9 139 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ZNF718Q3SXZ3 478 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 KLHL22Q53GT1 634 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 MBNL2Q5VZF2 373 aaKnown RBP14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 C11orf71Q6IPW1 123 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ZNF322Q6U7Q0 402 aaPredicted RBP14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 KRT77Q7Z794 578 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 CDH24Q86UP0 819 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ZNF679Q8IYX0 411 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 SYNPRQ8TBG9 265 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 SLC25A40Q8TBP6 338 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 MBD6Q96DN6 1003 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 LGALS12Q96DT0 336 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 OR8B4Q96RC9 309 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 MROQ9BYG7 248 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 ANKRD60Q9BZ19 345 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 PLK3Q9H4B4 646 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 SP140LQ9H930 580 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 AMBNQ9NP70 447 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 SLCO1C1Q9NYB5 712 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 PLEKHA6Q9Y2H5 1048 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 STARD10Q9Y365 291 aa14.14□□□□□ -0.15
PACSIN3-210ENST00000533686 AKAP6Q13023 2319 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 IGLV3-9A0A075B6K5 115 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 A0A1W2PQL4 384 aaPredicted RBP14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 TMEM129A0AVI4 362 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 OVOL3O00110 214 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 APOL3O95236 402 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 FADS2O95864 444 aaKnown RBP14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 LCATP04180 440 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 BMP4P12644 408 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 ERVS71-1P61550 626 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 SMN1Q16637 294 aaKnown RBP14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 LRRN1Q6UXK5 716 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 NAA40Q86UY6 237 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 ZNF283Q8N7M2 679 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 OR10H4Q8NGA5 316 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 KLF14Q8TD94 323 aaPredicted RBP14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 DOK1Q99704 481 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 MRPL37Q9BZE1 423 aaKnown RBP14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 OR2J1Q9GZK6 312 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 RAB26Q9ULW5 256 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 TACC2O95359 2948 aa14.13□□□□□ -0.15
PACSIN3-210ENST00000533686 SETXQ7Z333 2677 aaKnown RBP14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 NOTCH2Q04721 2471 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 IRGMA1A4Y4 181 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 ACOD1A6NK06 481 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 PRR32B1ATL7 298 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 IGHV3-13P01766 116 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 PAX1P15863 534 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 MYF6P23409 242 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 GCH1P30793 250 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 SLC6A9P48067 706 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 CX3CR1P49238 355 aa14.12□□□□□ -0.15
PACSIN3-210ENST00000533686 RIDAP52758 137 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms