RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 MMP15P51511 669 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 ACTR3P61158 418 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 EIF2B1Q14232 305 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 TSTQ16762 297 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 TMEM249Q2WGJ8 235 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 HFEQ30201 348 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 KLHL12Q53G59 568 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 PLBD1Q6P4A8 553 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 FBXW12Q6X9E4 464 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 AMIGO2Q86SJ2 522 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 PEG10Q86TG7 708 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 ERI1Q8IV48 349 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 ZNF511Q8NB15 262 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 LRTOMTQ8WZ04 291 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 TIMD4Q96H15 378 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 C1QTNF5Q9BXJ0 243 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 BPESC1Q9GZL8 116 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 WDR76Q9H967 626 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 CENPMQ9NSP4 180 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 DDX28Q9NUL7 540 aaKnown RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 TVP23BQ9NYZ1 205 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 H2AFY2Q9P0M6 372 aaPredicted RBP12.71□□□□□ -0.37
PUF60-221ENST00000533162 ORC6Q9Y5N6 252 aa12.71□□□□□ -0.37
PUF60-221ENST00000533162 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
PUF60-221ENST00000533162 M0R135 149 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 ADH4P08319 380 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 ACSM4P0C7M7 580 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 CLUP10909 449 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 IGFBP5P24593 272 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 CRYBB2P43320 205 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 MAGEB1P43366 347 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 RIN1Q13671 783 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 PCK2Q16822 640 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 RHOUQ7L0Q8 258 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
PUF60-221ENST00000533162 CPOQ8IVL8 374 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 OR6N2Q8NGY6 317 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 HPS1Q92902 700 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 SLAMF6Q96DU3 332 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 ZNF799Q96GE5 643 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 MAP6Q96JE9 813 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
PUF60-221ENST00000533162 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 PTTG3PQ9NZH4 202 aa12.7□□□□□ -0.38
PUF60-221ENST00000533162 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
PUF60-221ENST00000533162 ZNF469Q96JG9 3925 aaPredicted RBP12.7□□□□□ -0.38
PUF60-221ENST00000533162 PPIHO43447 177 aaKnown RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 IGHV1-46P01743 117 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 CD55P08174 381 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 COL8A2P25067 703 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 CDK5R2Q13319 367 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 USP51Q70EK9 711 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 OR2Z1Q8NG97 314 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 OR13G1Q8NGZ3 307 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 PYDC1Q8WXC3 89 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 RAB1CQ92928 201 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 KCNJ15Q99712 375 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 SEMA6AQ9H2E6 1030 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 OPA3Q9H6K4 179 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 MED20Q9H944 212 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 PNRC2Q9NPJ4 139 aaKnown RBP12.69□□□□□ -0.38
PUF60-221ENST00000533162 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
PUF60-221ENST00000533162 A8MV72 311 aaPredicted RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 CLDN25C9JDP6 229 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 LYNX1G3V0Z9 82 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 TACSTD2P09758 323 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 LYNX1P0DP58 116 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 RPS27P42677 84 aaKnown RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 RAD23AP54725 363 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 LINC01590Q5TEZ4 76 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 PGAP1Q75T13 922 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 DPY19L4Q7Z388 723 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 OR8G5Q8NG78 346 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 SPRYD4Q8WW59 207 aaPredicted RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 MARCH7Q9H992 704 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 MSL2Q9HCI7 577 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 ZNF275Q9NSD4 429 aaPredicted RBP12.68□□□□□ -0.38
PUF60-221ENST00000533162 TMEM100Q9NV29 134 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 TMEM14AQ9Y6G1 99 aa12.68□□□□□ -0.38
PUF60-221ENST00000533162 TEP1Q99973 2627 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms