RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SERPINF1P36955 418 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 CENPAP49450 140 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 CLRN1P58418 232 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 IRF3Q14653 427 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 C1QTNF12Q5T7M4 302 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 LINC01590Q5TEZ4 76 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 LCN1P1Q5VSP4 162 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 FBXW9Q5XUX1 488 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 SHFQ7M4L6 423 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 AAED1Q7RTV5 226 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZBTB46Q86UZ6 589 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 UBE2J2Q8N2K1 259 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 PROKR2Q8NFJ6 384 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR51G2Q8NGK0 314 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR6K6Q8NGW6 343 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 TMEM186Q96B77 213 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 NMD3Q96D46 503 aaKnown RBP9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR2M2Q96R28 347 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 C1QTNF6Q9BXI9 259 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 HIF1ANQ9NWT6 349 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 DIMT1Q9UNQ2 313 aaKnown RBP9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 COMMD3-BMI1R4GMX3 469 aa9.74□□□□□ -0.85
TRAPPC4-213ENST00000533149 IGLV1-36A0A0B4J1U3 117 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 A0A1W2PR80 420 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 TVP23AA6NH52 213 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 CENPBD1B2RD01 187 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 J3QRE1 110 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 GPR171O14626 319 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 AKAP8O43823 692 aaKnown RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF432O94892 652 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 ALX3O95076 343 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 RAB36O95755 333 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 MRPL3P09001 348 aaKnown RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 SBK2P0C263 348 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 HKR1P10072 659 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 CTLA4P16410 223 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 DCKP27707 260 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 RPL5P46777 297 aaKnown RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 PPOXP50336 477 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 IDH3GP51553 393 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 EMX1Q04741 257 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 FMODQ06828 376 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 THEM4Q5T1C6 240 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 LRFN4Q6PJG9 635 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC25A47Q6Q0C1 308 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 SVOPQ8N4V2 548 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 ZNF511Q8NB15 262 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 OR6N1Q8NGY5 312 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 NEU4Q8WWR8 484 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 NSMAFQ92636 917 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 CDCA4Q9BXL8 241 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 ADGRL4Q9HBW9 690 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 TAS2R16Q9NYV7 291 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 CLEC2DQ9UHP7 191 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 RCE1Q9Y256 329 aa9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 COA3Q9Y2R0 106 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC4-213ENST00000533149 ARFGEF3Q5TH69 2177 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 IGKV1D-43A0A0B4J1Z2 117 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 ATP6V1G2-DDX39BF2Z307 99 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 SLC43A1O75387 559 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 GPANK1O95872 356 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 QDPRP09417 244 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 JUNBP17275 347 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 EDNRAP25101 427 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 ALDH3B2P48448 385 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 CSNK1A1P48729 337 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 SELENOPP49908 381 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 ETV1P50549 477 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 BLVRAP53004 296 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 HCCSP53701 268 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 POU4F2Q12837 409 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 NEDD8Q15843 81 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 GABRA6Q16445 453 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 HIST3H3Q16695 136 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 PHYHD1Q5SRE7 291 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 RNLSQ5VYX0 342 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 XAF1Q6GPH4 301 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 DNM1P34Q6PK57 102 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 LYPD4Q6UWN0 246 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 LHFPL3Q86UP9 236 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 C20orf196Q8IYI0 205 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 TMEM123Q8N131 208 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 C17orf78Q8N4C9 275 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 ACBD7Q8N6N7 88 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 MCHR2Q969V1 340 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 TMEM45BQ96B21 275 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 APH1AQ96BI3 265 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 CNN2Q99439 309 aaKnown RBP9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 VCX3AQ9NNX9 186 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 ACOT13Q9NPJ3 140 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 PARPBPQ9NWS1 579 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 CHCHD3Q9NX63 227 aaKnown RBP9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 EMC3Q9P0I2 261 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 AMDHD2Q9Y303 409 aa9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 NOSIPQ9Y314 301 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms