RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SPRNQ5BIV9 151 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 OR9Q1Q8NGQ5 310 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 RAB1CQ92928 201 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 TIMD4Q96H15 378 aa25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 PNRC2Q9NPJ4 139 aaKnown RBP25.68■■□□□ 1.7
SSSCA1-207ENST00000533115 TVP23AA6NH52 213 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 DNAJC8O75937 253 aaPredicted RBP25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 SRD5A1P18405 259 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 TNFSF4P23510 183 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 CRMP1Q14194 572 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 COLCA1Q6ZS62 124 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 SPATA24Q86W54 205 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 OR2Z1Q8NG97 314 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 OR51L1Q8NGJ5 315 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 C1QTNF5Q9BXJ0 243 aa25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 TMEFF2Q9UIK5 374 aaPredicted RBP25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 FBN1P35555 2871 aaKnown RBP25.67■■□□□ 1.7
SSSCA1-207ENST00000533115 F5H5K5 113 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 ACSM4P0C7M7 580 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 SLC3A1Q07837 685 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 TMEM179BQ7Z7N9 219 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 MAP6Q96JE9 813 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 NMNAT2Q9BZQ4 307 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 ZNF665Q9H7R5 613 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 POMPQ9Y244 141 aa25.66■■□□□ 1.7
SSSCA1-207ENST00000533115 IFNGP01579 166 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 SLC25A1P53007 311 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 OR2T2Q6IF00 324 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 LYPD4Q6UWN0 246 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 GLCCI1Q86VQ1 547 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 OR5AS1Q8N127 324 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 TEX47Q8TBZ9 253 aa25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 PDP1Q9P0J1 537 aaPredicted RBP25.65■■□□□ 1.7
SSSCA1-207ENST00000533115 TANC2Q9HCD6 1990 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 RIIAD1A6NNX1 92 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 GYPBP06028 91 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 SPI1P17947 270 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 RPS27P42677 84 aaKnown RBP25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 YY1AP1Q9H869 796 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 WDR76Q9H967 626 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 LPAR2Q9HBW0 351 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 CMC2Q9NRP2 79 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 IL19Q9UHD0 177 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 COMMD3-BMI1R4GMX3 469 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 MXRA5Q9NR99 2828 aa25.64■■□□□ 1.7
SSSCA1-207ENST00000533115 DNHD1Q96M86 4753 aa25.64■■□□□ 1.69
SSSCA1-207ENST00000533115 COL6A5A8TX70 2615 aa25.64■■□□□ 1.69
SSSCA1-207ENST00000533115 TCRBV3S1A0A5B6 114 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 H3BN98 237 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 MSMBP08118 114 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 TNFRSF1AP19438 455 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 PCMT1P22061 227 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 FMO3P31513 532 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 OR8G5Q8NG78 346 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 OR10S1Q8NGN2 331 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 OR51F2Q8NH61 342 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 TMEM186Q96B77 213 aa25.63■■□□□ 1.69
SSSCA1-207ENST00000533115 SURF4O15260 269 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 GSC2O15499 205 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 CLUP10909 449 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 PSKH1P11801 424 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF3P17036 446 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 GRK5P34947 590 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 TPTEP56180 551 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 PEG10Q86TG7 708 aaKnown RBP25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 NAA40Q86UY6 237 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 IQCF1Q8N6M8 205 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 SPTSSAQ969W0 71 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 RAB39BQ96DA2 213 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF582Q96NG8 517 aaPredicted RBP25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 CADM1Q9BY67 442 aaKnown RBP25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 HIF1ANQ9NWT6 349 aa25.62■■□□□ 1.69
SSSCA1-207ENST00000533115 FKBP6O75344 327 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 DEAF1O75398 565 aaPredicted RBP25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 E2F6O75461 281 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 LCATP04180 440 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ANPEPP15144 967 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 THBS2P35442 1172 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ENTPD1P49961 510 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 CBX1P83916 185 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 BNIP1Q12981 228 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 PCK2Q16822 640 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ACSM5Q6NUN0 579 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 DCXRQ7Z4W1 244 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ATG16L2Q8NAA4 619 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF511Q8NB15 262 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 PAPD5Q8NDF8 572 aaKnown RBP25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 ITLN1Q8WWA0 313 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 HCAR1Q9BXC0 346 aa25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 DDX28Q9NUL7 540 aaKnown RBP25.61■■□□□ 1.69
SSSCA1-207ENST00000533115 IQCF6A8MYZ5 107 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 M0R135 149 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 IGHV2-5P01817 119 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 SPARCP09486 303 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 SELEP16581 610 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 BLVRAP53004 296 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 SLC27A4Q6P1M0 643 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 OR6K6Q8NGW6 343 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 OR13G1Q8NGZ3 307 aa25.6■■□□□ 1.69
SSSCA1-207ENST00000533115 ZNF799Q96GE5 643 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms