RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 OR1J2Q8NGS2 313 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 GPA33Q99795 319 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF223Q9UK11 482 aaPredicted RBP13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 CACNA1IQ9P0X4 2223 aa13.81□□□□□ -0.2
PCDHA3-202ENST00000532566 MED6O75586 246 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 ALX3O95076 343 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 ERVK-16P61578 105 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 OGFOD3Q6PK18 319 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 OR51A2Q8NGJ7 313 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 OR4C16Q8NGL9 310 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 TAS2R5Q9NYW4 299 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 TRAPPC2LQ9UL33 140 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 CBR3O75828 277 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF136P52737 540 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 MYBPHQ13203 477 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 SCARB1Q8WTV0 552 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 LRRC46Q96FV0 321 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 NECAP2Q9NVZ3 263 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 LOXL2Q9Y4K0 774 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 PCYT1BQ9Y5K3 369 aaPredicted RBP13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 RP1P56715 2156 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 SSBP1Q04837 148 aaKnown RBP13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 TSPAN32Q96QS1 320 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 FOXJ3Q9UPW0 622 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 S100PP25815 95 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 CAMK2BQ13554 666 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 OR2AK2Q8NG84 335 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 PTP4A1Q93096 173 aa13.8□□□□□ -0.2
PCDHA3-202ENST00000532566 OTOFQ9HC10 1997 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF121P58317 390 aaPredicted RBP13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 UBE2MP61081 183 aaKnown RBP13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 LINC00303Q3SY05 128 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 DMKNQ6E0U4 476 aaPredicted RBP13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 KANSL1Q7Z3B3 1105 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 DEFB123Q8N688 67 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 NOXO1Q8NFA2 376 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF649Q9BS31 505 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 ANKRD34BA5PLL1 514 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 SHISA8B8ZZ34 492 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 TBPP20226 339 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 CD79BP40259 229 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 CD226Q15762 336 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 FUT7Q11130 342 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 PEA15Q15121 130 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 INTS12Q96CB8 462 aaKnown RBP13.79□□□□□ -0.2
PCDHA3-202ENST00000532566 IGHV3-15A0A0B4J1V0 119 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SEMG1P04279 462 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF85Q03923 595 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 FMODQ06828 376 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 OR10G3Q8NGC4 313 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 FAM212BQ9NTI7 297 aaPredicted RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 CASP8AP2Q9UKL3 1982 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 HRKO00198 91 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PHF1O43189 567 aaPredicted RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SNAPINO95295 136 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 RHBDD2Q6NTF9 364 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PLXDC2Q6UX71 529 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 LGI3Q8N145 548 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SVBPQ8N300 66 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 BHLHE23Q8NDY6 225 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PXT1Q8NFP0 134 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 IP6K3Q96PC2 410 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PTDSS2Q9BVG9 487 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SARGQ9BW04 601 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 NMNAT2Q9BZQ4 307 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 RLFQ13129 1914 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 CCDC163A0A0D9SF12 145 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 RAB6AP20340 208 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 EPHA8P29322 1005 aaPredicted RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 AADACL3Q5VUY0 350 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 ZNF770Q6IQ21 691 aaPredicted RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 LHX9Q9NQ69 397 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 AKR7A2O43488 359 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 OR4E1P0C645 316 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 MSMO1Q15800 293 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 PHLDA2Q53GA4 152 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 DEGS2Q6QHC5 323 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 ANKRD37Q7Z713 158 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 MYOTQ9UBF9 498 aa13.78□□□□□ -0.2
PCDHA3-202ENST00000532566 TPRP12270 2363 aaKnown RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 PDCD11Q14690 1871 aaKnown RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 C1orf196B1AJZ1 125 aa13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 MSTNO14793 375 aa13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 GLSO94925 669 aaPredicted RBP13.77□□□□□ -0.2
PCDHA3-202ENST00000532566 TNFSF4P23510 183 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms