RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 MMP7P09237 267 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 RCC1P18754 421 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 GRPRP30550 384 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR3A1P47881 315 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 KCNAB1Q14722 419 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF101Q8IZC7 436 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF740Q8NDX6 193 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR56A1Q8NGH5 318 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR6T1Q8NGN1 323 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 HAVCR2Q8TDQ0 301 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 GPR148Q8TDV2 347 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 FAM210BQ96KR6 192 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 JSRP1Q96MG2 331 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF587Q96SQ5 575 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 GPER1Q99527 375 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SGPP1Q9BX95 441 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 GPR173Q9NS66 373 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 TESQ9UGI8 421 aaKnown RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SPACA6W5XKT8 324 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 REV3LO60673 3130 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 TMEM210A6NLX4 147 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 COLCA2A8K830 154 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 KDM4EB2RXH2 506 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PLRG1O43660 514 aaKnown RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 C8orf89P0DMQ9 161 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 CSNK2A2P19784 350 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 CD82P27701 267 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 HTR5AP47898 357 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PNLIPRP2P54317 469 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 H2BFSP57053 126 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SYPL1Q16563 259 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 MIDNQ504T8 468 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SDR9C7Q8NEX9 313 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR4D9Q8NGE8 314 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR4K13Q8NH42 304 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 GRHL3Q8TE85 626 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 MIB2Q96AX9 1013 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 LCORQ96JN0 433 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PDCD1LG2Q9BQ51 273 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 COL25A1Q9BXS0 654 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PARD6AQ9NPB6 346 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 MKKSQ9NPJ1 570 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PITPNC1Q9UKF7 332 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ZDHHC8Q9ULC8 765 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ZNF878C9JN71 531 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC16A5O15375 505 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 STK17BO94768 372 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 CCKBRP32239 447 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 CX3CR1P49238 355 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 LIM2P55344 173 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 TBPL1P62380 186 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 DHRS2Q13268 280 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PYY3Q5JQD4 70 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 COL5A1-AS1Q5SY13 56 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 LEMD1Q68G75 181 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 DHRS13Q6UX07 377 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 LANCL3Q6ZV70 420 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 MDGA2Q7Z553 956 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 LYG2Q86SG7 212 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 C11orf42Q8N5U0 333 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 HSD17B11Q8NBQ5 300 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 BBS1Q8NFJ9 593 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR51D1Q8NGF3 324 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 OR52E1Q8NGJ3 308 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 POC1BQ8TC44 478 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 RSC1A1Q92681 617 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 NEIL2Q969S2 332 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 FAM46BQ96A09 425 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PIK3IP1Q96FE7 263 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SNX22Q96L94 193 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 F2RL3Q96RI0 385 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 SEMA6CQ9H3T2 930 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 PATZ1Q9HBE1 687 aaKnown RBP6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 ASCL3Q9NQ33 180 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 C5AR2Q9P296 337 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 MTFP1Q9UDX5 166 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 FBXO4Q9UKT5 387 aa6.16□□□□□ -1.42
TGFBR3-209ENST00000532540 A0A087WUU8 490 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 A0A087WV62 115 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 DCDC2BA2VCK2 349 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 ERI3O43414 337 aaKnown RBP6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 PPP1R3DO95685 299 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 IL33O95760 270 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 ACTL6AO96019 429 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 OR8U8P0C7N1 319 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 AOAHP28039 575 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 IMPA1P29218 277 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 BTCP35070 178 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 POLR2HP52434 150 aaKnown RBP6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 SLC26A5P58743 744 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 GPR18Q14330 331 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 TGIF1Q15583 401 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 DEFB134Q4QY38 66 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 EXOSC6Q5RKV6 272 aaKnown RBP6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 DCST2Q5T1A1 773 aa6.15□□□□□ -1.42
TGFBR3-209ENST00000532540 NKAIN4Q8IVV8 208 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms