RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 NMNAT1Q9HAN9 279 aaPredicted RBP11.97□□□□□ -0.49
CTSB-221ENST00000531502 INTS9Q9NV88 658 aaKnown RBP11.97□□□□□ -0.49
CTSB-221ENST00000531502 VSX1Q9NZR4 365 aaPredicted RBP11.97□□□□□ -0.49
CTSB-221ENST00000531502 CLN8Q9UBY8 286 aa11.97□□□□□ -0.49
CTSB-221ENST00000531502 A0A0G2JND7 137 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 CLPSL1A2RUU4 121 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 XKRYO14609 159 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 MRASO14807 208 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.49
CTSB-221ENST00000531502 SLC16A7O60669 478 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 PTP4A3O75365 173 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 KHDRBS3O75525 346 aaKnown RBP11.96□□□□□ -0.49
CTSB-221ENST00000531502 HLA-DPB1P04440 258 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 MELTFP08582 738 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 MMP9P14780 707 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 IFNA8P32881 189 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 KRR1Q13601 381 aaKnown RBP11.96□□□□□ -0.49
CTSB-221ENST00000531502 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 C17orf107Q6ZR85 190 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 DCDC5Q6ZRR9 648 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 PTCHD4Q6ZW05 846 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 NLRC3Q7RTR2 1065 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 C1orf87Q8N0U7 546 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 BHLHE23Q8NDY6 225 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 OR2T12Q8NG77 320 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 SIKE1Q9BRV8 207 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 MMP27Q9H306 513 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 NRIP3Q9NQ35 241 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 TNFRSF19Q9NS68 423 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 ARMCX1Q9P291 453 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
CTSB-221ENST00000531502 SIGLEC7Q9Y286 467 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 LHFPL6Q9Y693 200 aa11.96□□□□□ -0.49
CTSB-221ENST00000531502 ELOVL7A1L3X0 281 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 LRRC30A6NM36 301 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 IFNW1P05000 195 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 SFTPBP07988 381 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 SDHAP31040 664 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 CFHR2P36980 270 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 RAD23AP54725 363 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 PRSS12P56730 875 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 FXYD6P3P58550 94 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
CTSB-221ENST00000531502 KLF10Q13118 480 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 CLEC12AQ5QGZ9 265 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 GPR157Q5UAW9 335 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 ASPHD2Q6ICH7 369 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
CTSB-221ENST00000531502 C19orf18Q8NEA5 215 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 FAM71F1Q96KD3 344 aaPredicted RBP11.95□□□□□ -0.5
CTSB-221ENST00000531502 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
CTSB-221ENST00000531502 COQ7Q99807 217 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 NUAK2Q9H093 628 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 WDR76Q9H967 626 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 TMEM100Q9NV29 134 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 CTSZQ9UBR2 303 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 POMT1Q9Y6A1 747 aa11.95□□□□□ -0.5
CTSB-221ENST00000531502 CENPVL3A0A0U1RRI6 287 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 BBIP1A8MTZ0 92 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 DCTN6O00399 190 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 ENSAO43768 121 aaKnown RBP11.94□□□□□ -0.5
CTSB-221ENST00000531502 CRYBA1P05813 215 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 FPR3P25089 353 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 CD200P41217 278 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 MEP1BQ16820 701 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 GPR139Q6DWJ6 353 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 CELF2-AS1Q8N7Q2 184 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 LZICQ8WZA0 190 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 ERGIC1Q969X5 290 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 CCT8L2Q96SF2 557 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 TMEM120AQ9BXJ8 343 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 HDHD2Q9H0R4 259 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 RERGLQ9H628 205 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 CMTM6Q9NX76 183 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 TMCC3Q9ULS5 477 aa11.94□□□□□ -0.5
CTSB-221ENST00000531502 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 M0QZ24 198 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 P2RY10O00398 339 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 FAM20BO75063 409 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 FCN3O75636 299 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 NDUFB2O95178 105 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 TXNDC12O95881 172 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 CDKN2AP42771 156 aaKnown RBP11.93□□□□□ -0.5
CTSB-221ENST00000531502 NPY4RP50391 375 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 RPL15P61313 204 aaKnown RBP11.93□□□□□ -0.5
CTSB-221ENST00000531502 COX10Q12887 443 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 GK2Q14410 553 aaPredicted RBP11.93□□□□□ -0.5
CTSB-221ENST00000531502 MPPED2Q15777 294 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 CORO6Q6QEF8 472 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 ZNF620Q6ZNG0 422 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 CBLL1Q75N03 491 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 ADCK1Q86TW2 530 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 LINC01006Q8NI28 216 aa11.93□□□□□ -0.5
CTSB-221ENST00000531502 SLC7A13Q8TCU3 470 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms