RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 ZNF208O43345 1280 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SYT7O43581 403 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 DCXO43602 365 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 LDB2O43679 373 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SLC37A4O43826 429 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 KCNK5O95279 499 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CST4P01036 141 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 IRF2P14316 349 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CMPK1P30085 196 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 AKT2P31751 481 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CCKARP32238 428 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SDC2P34741 201 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 PTGER4P35408 488 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 GALCP54803 685 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 MAXP61244 160 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 C2orf80Q0P641 193 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 OLIG2Q13516 323 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 HLFQ16534 295 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 TMEM255AQ5JRV8 349 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 NCMAPQ5T1S8 102 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 NCR3LG1Q68D85 454 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 Q6ZSV7 163 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 MOB2Q70IA6 237 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ZNF571Q7Z3V5 609 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 C5orf24Q7Z6I8 188 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 NRROSQ86YC3 692 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CBLN2Q8IUK8 224 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 C20orf196Q8IYI0 205 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 HS3ST5Q8IZT8 346 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 BATF2Q8N1L9 274 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 HIST3H2BBQ8N257 126 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ZNF664Q8N3J9 261 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SDR9C7Q8NEX9 313 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 OR4K5Q8NGD3 323 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 OR1J2Q8NGS2 313 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 OR56B4Q8NH76 319 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SMAP2Q8WU79 429 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 C15orf40Q8WUR7 153 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ARL11Q969Q4 196 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ANKRD9Q96BM1 317 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 UPRTQ96BW1 309 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 GALNT14Q96FL9 552 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 LMLNQ96KR4 655 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 JSRP1Q96MG2 331 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 OR2M4Q96R27 311 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CLCC1Q96S66 551 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 CHRDL1Q9BU40 450 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ANKRA2Q9H9E1 313 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 AKIRIN1Q9H9L7 192 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 SLC17A5Q9NRA2 495 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ANKRD10Q9NXR5 420 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 IL17BQ9UHF5 180 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 HSF4Q9ULV5 492 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 ORC6Q9Y5N6 252 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.96□□□□□ -1.62
CD44-231ENST00000531110 PAPPAQ13219 1627 aa4.96□□□□□ -1.62
CD44-231ENST00000531110 TOGARAM1Q9Y4F4 1720 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CICQ96RK0 1608 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 A0A0D9SFI3 127 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 LOC100130705A0A1B0GUX0 176 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 RNF222A6NCQ9 220 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 NKX2-6A6NCS4 301 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ARL5CA6NH57 179 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 OR5H14A6NHG9 310 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ANKRD63C9JTQ0 380 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ZNF670-ZNF695F2Z2N8 137 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 G3V3Q6 166 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 GPR31O00270 319 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CXCR6O00574 342 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 EPHB6O15197 1021 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ZNF749O43361 778 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 IFNA5P01569 189 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 UMODP07911 640 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 MMP2P08253 660 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 CST2P09228 141 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FGF3P11487 239 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 TDGF1P13385 188 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 GSTM3P21266 225 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 F2RP25116 425 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 PSMB9P28065 219 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 IL2RGP31785 369 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FASLGP48023 281 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 TTPAP49638 278 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 GEMP55040 296 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 SNU13P55769 128 aaKnown RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 SEC61A1P61619 476 aaKnown RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 RPS15P62841 145 aaKnown RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 NAAAQ02083 359 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 FHL1Q13642 323 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 TNFAIP1Q13829 316 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 HERPUD1Q15011 391 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 EBPQ15125 230 aaKnown RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 TSNQ15631 228 aaKnown RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 NDUFA9Q16795 377 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 HYAL4Q2M3T9 481 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 ZNF284Q2VY69 593 aa4.95□□□□□ -1.62
CD44-231ENST00000531110 TMEM176BQ3YBM2 270 aaPredicted RBP4.95□□□□□ -1.62
CD44-231ENST00000531110 ZNF628Q5EBL2 1059 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms