RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PNMA6AP0CW24 399 aaPredicted RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 IVDP26440 423 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 HRH1P35367 487 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 P2RY2P41231 377 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 RPS10P46783 165 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 CRISP1P54107 249 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 RPS15AP62244 130 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 SKP1P63208 163 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 PSG5Q15238 335 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM183BQ1AE95 376 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 ZBED5Q49AG3 693 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TPRG1LQ5T0D9 272 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 CCNJQ5T5M9 372 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 ANKRD22Q5VYY1 191 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 PTRHD1Q6GMV3 140 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 LYPD2Q6UXB3 125 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TEX43Q6ZNM6 134 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 LINC00336Q6ZUF6 198 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 OR2W3Q7Z3T1 314 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 ABHD12BQ7Z5M8 362 aaPredicted RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 CMC1Q7Z7K0 106 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF429Q86V71 674 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 TMEM183AQ8IXX5 376 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 SELENOHQ8IZQ5 122 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 MREGQ8N565 214 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 OR5K2Q8NHB8 316 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 C17orf50Q8WW18 174 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 CPB2Q96IY4 423 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 SERPINB12Q96P63 405 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 NAPGQ99747 312 aaPredicted RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 NDEL1Q9GZM8 345 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 LINC00597Q9H2U6 94 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 SLCO1B3Q9NPD5 702 aa3□□□□□ -1.93
C11orf88-204ENST00000529661 CCDC59Q9P031 241 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF282Q9UDV7 671 aaPredicted RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 YARS2Q9Y2Z4 477 aaKnown RBP3□□□□□ -1.93
C11orf88-204ENST00000529661 NOTCH2Q04721 2471 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NFASCO94856 1347 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 IGHV3-64DA0A0J9YX35 117 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 A6NDX4 124 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 F6UB75 175 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 H7C0C1 242 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 KMOO15229 486 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 XRCC2O43543 280 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 DPM1O60762 260 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 SLC19A2O60779 497 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 SS18L1O75177 396 aaPredicted RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 SUPT3HO75486 399 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 CLDN11O75508 207 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 AIFM1O95831 613 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PCCAP05165 728 aaPredicted RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 KLK1P06870 262 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NEFHP12036 1026 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 ZNF30P17039 623 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 CNR1P21554 472 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 MDKP21741 143 aaPredicted RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 OMGP23515 440 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PSMB6P28072 239 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NBL1P41271 181 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NCBP2P52298 156 aaKnown RBP eCLIP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 HMGCS1Q01581 520 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 MXD1Q05195 221 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 ART3Q13508 389 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 TRAM2Q15035 370 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PON3Q15166 354 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 TTLL9Q3SXZ7 439 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 AP1ARQ63HQ0 302 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 MBOAT1Q6ZNC8 495 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 STRADAQ7RTN6 431 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 STPG2Q8N412 459 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 TRAM1L1Q8N609 369 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 Q8N9W7 124 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 MDS2Q8NDY4 140 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 OR4D6Q8NGJ1 314 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 OR5B3Q8NH48 314 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 LGALS14Q8TCE9 139 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 APH1AQ96BI3 265 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 DNAJC19Q96DA6 116 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 FAM210BQ96KR6 192 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 SYT4Q9H2B2 425 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PATZ1Q9HBE1 687 aaKnown RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 MS4A12Q9NXJ0 267 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NKIRAS1Q9NYS0 192 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 DEC1Q9P2X7 70 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 NEU3Q9UQ49 428 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 RCL1Q9Y2P8 373 aaKnown RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PRG3Q9Y2Y8 225 aaPredicted RBP2.99□□□□□ -1.93
C11orf88-204ENST00000529661 PPIL1Q9Y3C6 166 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 CARMIL3Q8ND23 1372 aa2.99□□□□□ -1.93
C11orf88-204ENST00000529661 COL16A1Q07092 1604 aaPredicted RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 TDRD6O60522 2096 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 MGAT4DA6NG13 374 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ITGB1BP1O14713 200 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 SCAMP2O15127 329 aaKnown RBP2.98□□□□□ -1.93
C11orf88-204ENST00000529661 RAD51BO15315 384 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 ENTPD5O75356 428 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 KRT16P08779 473 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 GNAO1P09471 354 aa2.98□□□□□ -1.93
C11orf88-204ENST00000529661 HTR2CP28335 458 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms