RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 A0A0G2JMZ2 1700 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 A0A0A6YYD4 124 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 A0A1B0GUA9 196 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SMIM23A6NLE4 172 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 GOLGA6L19H0YKK7 550 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 BCL2L11O43521 198 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 CYTH3O43739 400 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 EIF4E2O60573 245 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 PFKFB2O60825 505 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ADAP1O75689 374 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 PLEKHA8P1O95397 391 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SEMA4FO95754 770 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RENP00797 406 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ASS1P00966 412 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 TACSTD2P09758 323 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RD3LP0DJH9 198 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ZNF7P17097 686 aaPredicted RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 HSD11B1P28845 292 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 GTF2H1P32780 548 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 NBL1P41271 181 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 GNPDA1P46926 289 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 TMED10P49755 219 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 RWDD2BP57060 319 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RPL27P61353 136 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 RPS15AP62244 130 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 VSNL1P62760 191 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ZNF33AQ06730 810 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 CYP24A1Q07973 514 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SLC36A2Q495M3 483 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 TMEM52BQ4KMG9 183 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 DMRTC1Q5HYR2 192 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 TPRG1LQ5T0D9 272 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SPESP1Q6UW49 350 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RTL4Q6ZR62 310 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ABHD13Q7L211 337 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 NUFIP2Q7Z417 695 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 SLC13A5Q86YT5 568 aaPredicted RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 LINC01561Q8N1V8 128 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 MS4A15Q8N5U1 240 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SUMF1Q8NBK3 374 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ZNF738Q8NE65 137 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 OR4D9Q8NGE8 314 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 OR2Y1Q8NGV0 311 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 CNIH3Q8TBE1 160 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 AENQ8WTP8 325 aaKnown RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 RAD51AP1Q96B01 352 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 NTNG2Q96CW9 530 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 PPP1R36Q96LQ0 422 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ZNF641Q96N77 438 aaPredicted RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 ZFP3Q96NJ6 502 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 CLCC1Q96S66 551 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ATP5SQ99766 215 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RAB34Q9BZG1 259 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ACTR3CQ9C0K3 210 aaPredicted RBP4.5□□□□□ -1.69
PCF11-202ENST00000528336 ELOVL4Q9GZR5 314 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 PORCNQ9H237 461 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 VCX3AQ9NNX9 186 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 NRN1Q9NPD7 142 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 SIRT7Q9NRC8 400 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 CUTCQ9NTM9 273 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 BFARQ9NZS9 450 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 DHRS7Q9Y394 339 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 V9GYY9 64 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 RLFQ13129 1914 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 ABCB11O95342 1321 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 TNFSF11O14788 317 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 DUSP11O75319 330 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 VAMP5O95183 116 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 DEXIO95424 95 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 HCKP08631 526 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 KRT16P08779 473 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 OR9G9P0C7N8 305 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PRPS1L1P21108 318 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 CFL1P23528 166 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 CALCRP30988 508 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 CAPZBP47756 277 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PRLHRP49683 370 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 EMDP50402 254 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 RAG2P55895 527 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 SNAP25P60880 206 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 ATP6V0D1P61421 351 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 ARF6P62330 175 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 MRPS25P82663 173 aaKnown RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 RGS1Q08116 209 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 RAB40BQ12829 278 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 BNIP2Q12982 314 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PSG5Q15238 335 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 UBE2V2Q15819 145 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 DGUOKQ16854 277 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 PGGHGQ32M88 737 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 ZNF506Q5JVG8 444 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 TCHHL1Q5QJ38 904 aaPredicted RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 RESP18Q5W5W9 173 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 FAHD2BQ6P2I3 314 aaPredicted RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 CCDC71Q8IV32 467 aaPredicted RBP4.49□□□□□ -1.69
PCF11-202ENST00000528336 FUNDC1Q8IVP5 155 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 TPRX1Q8N7U7 411 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 NOXO1Q8NFA2 376 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 OR4F17Q8NGA8 305 aa4.49□□□□□ -1.69
PCF11-202ENST00000528336 OR4F5Q8NH21 305 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms