RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 MMP27Q9H306 513 aa13.15□□□□□ -0.3
CTTN-212ENST00000527962 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
CTTN-212ENST00000527962 KRCC1Q9NPI7 259 aaPredicted RBP13.15□□□□□ -0.3
CTTN-212ENST00000527962 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.3
CTTN-212ENST00000527962 POMT1Q9Y6A1 747 aa13.15□□□□□ -0.3
CTTN-212ENST00000527962 VWFP04275 2813 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 A0A087WUU8 490 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 CLPSL1A2RUU4 121 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 IQCF6A8MYZ5 107 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 F5H5P2 479 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 FXYD1O00168 92 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 P2RY10O00398 339 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 RER1O15258 196 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 NDUFA7O95182 113 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 ZNF682O95780 498 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 CRABP1P29762 137 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 RBMXP38159 391 aaKnown RBP13.14□□□□□ -0.31
CTTN-212ENST00000527962 GATA4P43694 442 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 GPR4P46093 362 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 RAD23AP54725 363 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 MALLQ13021 153 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 KCNMB1Q16558 191 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 CCDC92Q53HC0 331 aaPredicted RBP13.14□□□□□ -0.31
CTTN-212ENST00000527962 WDR25Q64LD2 544 aaPredicted RBP13.14□□□□□ -0.31
CTTN-212ENST00000527962 Q6YL49 198 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 ZNF620Q6ZNG0 422 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 GATAD2BQ8WXI9 593 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 DACT3Q96B18 629 aaPredicted RBP13.14□□□□□ -0.31
CTTN-212ENST00000527962 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 SLC22A4Q9H015 551 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 TRIM36Q9NQ86 728 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 TNFRSF19Q9NS68 423 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 ERVK-18Q9QC07 812 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
CTTN-212ENST00000527962 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
CTTN-212ENST00000527962 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 GSTA4O15217 222 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 KRT34O76011 436 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 DBHP09172 617 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 TROVE2P10155 538 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTTN-212ENST00000527962 RPS6KA3P51812 740 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 ECH1Q13011 328 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 IFI44LQ53G44 452 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 FAM122BQ7Z309 247 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 ARPINQ7Z6K5 226 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 PNLDC1Q8NA58 520 aaKnown RBP13.13□□□□□ -0.31
CTTN-212ENST00000527962 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
CTTN-212ENST00000527962 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTTN-212ENST00000527962 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
CTTN-212ENST00000527962 MARCH7Q9H992 704 aa13.13□□□□□ -0.31
CTTN-212ENST00000527962 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
CTTN-212ENST00000527962 FAM32AQ9Y421 112 aaKnown RBP13.13□□□□□ -0.31
CTTN-212ENST00000527962 IGHV3-64DA0A0J9YX35 117 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 H0YL77 283 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 J3KTA2 159 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 MLNRO43193 412 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 NDUFA2O43678 99 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 TOX4O94842 621 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 KLF10Q13118 480 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 TBPL2Q6SJ96 375 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 Q8TCH9 128 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 DYRK2Q92630 601 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 CITED1Q99966 193 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 CDADC1Q9BWV3 514 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 FN3KRPQ9HA64 309 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
CTTN-212ENST00000527962 SNX13Q9Y5W8 968 aa13.12□□□□□ -0.31
CTTN-212ENST00000527962 SOCS2O14508 198 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 FFAR1O14842 300 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 HLA-DPB1P04440 258 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 METTL11BQ5VVY1 283 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 DPY19L2P2Q6ZN68 376 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
CTTN-212ENST00000527962 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
CTTN-212ENST00000527962 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
CTTN-212ENST00000527962 RPS6KA6Q9UK32 745 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 AURKCQ9UQB9 309 aa13.11□□□□□ -0.31
CTTN-212ENST00000527962 A0A1B0GWJ7 208 aa13.1□□□□□ -0.31
CTTN-212ENST00000527962 F5H5K5 113 aa13.1□□□□□ -0.31
CTTN-212ENST00000527962 TNFRSF13BO14836 293 aaPredicted RBP13.1□□□□□ -0.31
CTTN-212ENST00000527962 PTP4A3O75365 173 aa13.1□□□□□ -0.31
CTTN-212ENST00000527962 MELTFP08582 738 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms