RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MRPL22Q9NWU5 206 aaKnown RBP13.18□□□□□ -0.3
CAPN1-213ENST00000527897 KLHL21Q9UJP4 597 aa13.18□□□□□ -0.3
CAPN1-213ENST00000527897 DYSFO75923 2080 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 AQP12BA6NM10 295 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 E2F6O75461 281 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 LCATP04180 440 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 MSMBP08118 114 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 RAC2P15153 192 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 KITLGP21583 273 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 POU1F1P28069 291 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 PRSS12P56730 875 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 LMO4P61968 165 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 Q6ZR03 302 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 PEG10Q86TG7 708 aaKnown RBP13.17□□□□□ -0.3
CAPN1-213ENST00000527897 AQP12AQ8IXF9 295 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 LNX2Q8N448 690 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 ZNRF4Q8WWF5 429 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 FEVQ99581 238 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 GAL3ST1Q99999 423 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 HIF1ANQ9NWT6 349 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-213ENST00000527897 CYB5R1Q9UHQ9 305 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 BAIAP2Q9UQB8 552 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 TANC2Q9HCD6 1990 aa13.17□□□□□ -0.3
CAPN1-213ENST00000527897 MXRA5Q9NR99 2828 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 RIIAD1A6NNX1 92 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 IFNGP01579 166 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ADH4P08319 380 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 SPARCP09486 303 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ACSM4P0C7M7 580 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 CLUP10909 449 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 FMO3P31513 532 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 GGT2P36268 569 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 SLC6A9P48067 706 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-213ENST00000527897 SLC3A1Q07837 685 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ECH1Q13011 328 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 RSPO1Q2MKA7 263 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF362Q5T0B9 420 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-213ENST00000527897 TMEM179BQ7Z7N9 219 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF511Q8NB15 262 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 OR10AD1Q8NGE0 317 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-213ENST00000527897 HCAR1Q9BXC0 346 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 N6AMT1Q9Y5N5 214 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 DNHD1Q96M86 4753 aa13.16□□□□□ -0.3
CAPN1-213ENST00000527897 IGHV3-64DA0A0J9YX35 117 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 DNAJC8O75937 253 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-213ENST00000527897 CD55P08174 381 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 ZNF3P17036 446 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 SPI1P17947 270 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 TNFRSF1AP19438 455 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 PCMT1P22061 227 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 TPTEP56180 551 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 MALLQ13021 153 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 TAF13Q15543 124 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 CXXC5Q7LFL8 322 aaKnown RBP13.15□□□□□ -0.3
CAPN1-213ENST00000527897 DCXRQ7Z4W1 244 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 HS3ST5Q8IZT8 346 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 SLC7A6OSQ96CW6 309 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-213ENST00000527897 C1orf159Q96HA4 380 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 MAP6Q96JE9 813 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 DDOQ99489 341 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 COPS4Q9BT78 406 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 MED20Q9H944 212 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 PNRC2Q9NPJ4 139 aaKnown RBP13.15□□□□□ -0.3
CAPN1-213ENST00000527897 CENPMQ9NSP4 180 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 KCNG2Q9UJ96 466 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 COMMD3-BMI1R4GMX3 469 aa13.15□□□□□ -0.3
CAPN1-213ENST00000527897 FAM183AA6NL82 134 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 H0YL77 283 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 J3QW42 95 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 M0R135 149 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 SURF4O15260 269 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-213ENST00000527897 SBK2P0C263 348 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 PSKH1P11801 424 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 ANPEPP15144 967 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 ENTPD1P49961 510 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 CBX1P83916 185 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
CAPN1-213ENST00000527897 FAHD2BQ6P2I3 314 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-213ENST00000527897 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
CAPN1-213ENST00000527897 OR10S1Q8NGN2 331 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms