RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SLC25A47Q6Q0C1 308 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 MBD3L2Q8NHZ7 208 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 GPR148Q8TDV2 347 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ALKBH3Q96Q83 286 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 TP63Q9H3D4 680 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 C12orf49Q9H741 205 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 PPP1R3EQ9H7J1 279 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 MALT1Q9UDY8 824 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 SS18L1O75177 396 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF254O75437 659 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 PTTG1O95997 202 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 PAHP00439 452 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ATF1P18846 271 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 PTBP1P26599 531 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 APEX1P27695 318 aaKnown RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 RANBP1P43487 201 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 RBPJQ06330 500 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 IL18Q14116 193 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 TSPO2Q5TGU0 170 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF544Q6NX49 715 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 CORO6Q6QEF8 472 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 FAM214BQ7L5A3 538 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 SAMD12Q8N8I0 201 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 TRMT10AQ8TBZ6 339 aaKnown RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF837Q96EG3 531 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-203ENST00000527275 SEC61A2Q9H9S3 476 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 SH3BGRL2Q9UJC5 107 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 GTF2A1LQ9UNN4 478 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 SLC22A13Q9Y226 551 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 ARHGAP21Q5T5U3 1957 aa16.51■□□□□ 0.23
SMPD1-203ENST00000527275 FUOMA2VDF0 154 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 PER3P56645 1201 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 FOXF2Q12947 444 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 GUSBP1Q15486 140 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 OR2A2Q6IF42 318 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 LRRC28Q86X40 367 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-203ENST00000527275 OR10AC1Q8NH08 325 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 APH1AQ96BI3 265 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 ABRACLQ9P1F3 81 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 ATXN7O15265 892 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-203ENST00000527275 HOXD4P09016 255 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-203ENST00000527275 CSF3P09919 207 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 NR2C1P13056 603 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 P2RY14Q15391 338 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 DEGS2Q6QHC5 323 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 CATSPERDQ86XM0 798 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 ST6GALNAC3Q8NDV1 305 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 OR51A4Q8NGJ6 313 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 HTRA1Q92743 480 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 PPP1R14AQ96A00 147 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 ULBP2Q9BZM5 246 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 SLITRK2Q9H156 845 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 SLCO5A1Q9H2Y9 848 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 TCF7L1Q9HCS4 588 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 CYSLTR2Q9NS75 346 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 SLC7A10Q9NS82 523 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 EXTL2Q9UBQ6 330 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 CYB5R1Q9UHQ9 305 aa16.5■□□□□ 0.23
SMPD1-203ENST00000527275 PCNX1Q96RV3 2341 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 KIR2DL2P43627 348 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-203ENST00000527275 BCAP31P51572 246 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 MFGE8Q08431 387 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-203ENST00000527275 LINGO2Q7L985 606 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF100Q8IYN0 542 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 GPR137CQ8N3F9 429 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF433Q8N7K0 673 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-203ENST00000527275 CNEP1R1Q8N9A8 125 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 GFI1Q99684 422 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 RBM24Q9BX46 236 aaKnown RBP16.49■□□□□ 0.23
SMPD1-203ENST00000527275 CENPMQ9NSP4 180 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 FBXL3Q9UKT7 428 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 TBC1D24Q9ULP9 559 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 R4GMQ9 66 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 CFAP46Q8IYW2 2715 aa16.49■□□□□ 0.23
SMPD1-203ENST00000527275 A0A1W2PQ09 198 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 H3BSH0 61 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 APOA1P02647 267 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 RAF1P04049 648 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 EIF4EP06730 217 aaKnown RBP16.48■□□□□ 0.23
SMPD1-203ENST00000527275 NPR2P20594 1047 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 CDAP32320 146 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 ZNF133P52736 654 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-203ENST00000527275 SCN1BQ07699 218 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 STAC2Q6ZMT1 411 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 GDPD3Q7L5L3 318 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-203ENST00000527275 NAXEQ8NCW5 288 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 IL17RDQ8NFM7 739 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 SETD6Q8TBK2 473 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 RNF133Q8WVZ7 376 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 EMC9Q9Y3B6 208 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 TRBV5-7A0A0A0MS05 114 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 ANKRD61A6NGH8 418 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 DHHO43323 396 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 KRT33AO76009 404 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 IL2RAP01589 272 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 H2BFMP0C1H6 154 aa16.48■□□□□ 0.23
SMPD1-203ENST00000527275 SNRPBP14678 240 aaKnown RBP16.48■□□□□ 0.23
SMPD1-203ENST00000527275 TIMP3P35625 211 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms