RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 LYSTQ99698 3801 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 DCTN5Q9BTE1 182 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 SIRPDQ9H106 197 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 MTHFD2LQ9H903 347 aaPredicted RBP4.33□□□□□ -1.72
SF3B2-205ENST00000526653 POLE3Q9NRF9 147 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 INPP5EQ9NRR6 644 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 ZNRD1Q9P1U0 126 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 GIMAP2Q9UG22 337 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 IL19Q9UHD0 177 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 CAB39Q9Y376 341 aaPredicted RBP4.33□□□□□ -1.72
SF3B2-205ENST00000526653 FIS1Q9Y3D6 152 aa4.33□□□□□ -1.72
SF3B2-205ENST00000526653 RNF103-CHMP3A0A140T963 221 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MEIOCA2RUB1 952 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 FAAHO00519 579 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 SURF4O15260 269 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 OR2T1O43869 369 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 PEX11AO75192 247 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 DUS4LO95620 317 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 CPSF4O95639 269 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 AGR2O95994 175 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 C1QCP02747 245 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 QDPRP09417 244 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 EEF1B2P24534 225 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 PAX6P26367 422 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ARRB2P32121 409 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 PMELP40967 661 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 GDI2P50395 445 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 UCP3P55916 312 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 BIDP55957 195 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 FUT5Q11128 374 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 GNA13Q14344 377 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 PTGR1Q14914 329 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ZIK1Q3SY52 487 aaPredicted RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ZNF404Q494X3 552 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 TCTEX1D4Q5JR98 221 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 UNQ9370/PRO34162Q6UXP9 181 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 UNQ6126/PRO20091Q6UXV3 157 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 CCDC121Q6ZUS5 278 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 VMO1Q7Z5L0 202 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MOGAT3Q86VF5 341 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 CLIP4Q8N3C7 705 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 C10orf53Q8N6V4 93 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 OR5R1Q8NH85 324 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 AKR7LQ8NHP1 331 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 RORBQ92753 470 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 L3HYPDHQ96EM0 354 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 METTL2AQ96IZ6 378 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 POM121L2Q96KW2 1035 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MAGEB18Q96M61 343 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 RCHY1Q96PM5 261 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 SSX3Q99909 188 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 DPCDQ9BVM2 203 aaPredicted RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MMADHCQ9H3L0 296 aaPredicted RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 A4GALTQ9NPC4 353 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MAN2C1Q9NTJ4 1040 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ATAD3AQ9NVI7 634 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 TMEM38BQ9NVV0 291 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 GLTPQ9NZD2 209 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ERVK-18Q9QC07 812 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 ZNF580Q9UK33 172 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 TMCC3Q9ULS5 477 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
SF3B2-205ENST00000526653 MAB21L2Q9Y586 359 aa4.32□□□□□ -1.72
SF3B2-205ENST00000526653 A0A087WUJ7 227 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 A0A1B0GW55 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 TCRBV4S1A1TA0A5B7 111 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 LRRC30A6NM36 301 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 TMEM114B3SHH9 223 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 C11orf98E9PRG8 122 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 AP4M1O00189 453 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 PHYHO14832 338 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 NPFFO15130 113 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 OR10H3O60404 316 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DBIP07108 87 aaKnown RBP4.31□□□□□ -1.72
SF3B2-205ENST00000526653 GUSBP08236 651 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 MMP7P09237 267 aaPredicted RBP4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 PRPH2P23942 346 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 CDAP32320 146 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 PSMB10P40306 273 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 MAGEA12P43365 314 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 LINC00205P59089 165 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 HPCAP84074 193 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 SGCAQ16586 387 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 CFAP157Q5JU67 520 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 FAM69AQ5T7M9 428 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
SF3B2-205ENST00000526653 DCDC5Q6ZRR9 648 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 RFPL4BQ6ZWI9 263 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 BTN2A1Q7KYR7 527 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 NET1Q7Z628 596 aaPredicted RBP4.31□□□□□ -1.72
SF3B2-205ENST00000526653 ZER1Q7Z7L7 766 aa4.31□□□□□ -1.72
SF3B2-205ENST00000526653 SLC22A9Q8IVM8 553 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms