RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 IZUMO2Q6UXV1 221 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 RFPL4BQ6ZWI9 263 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 OR1J1Q8NGS3 322 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ABHD4Q8TB40 342 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 THEM6Q8WUY1 208 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 MRPL24Q96A35 216 aaKnown RBP17.86■□□□□ 0.45
CD44-222ENST00000526025 MBD6Q96DN6 1003 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 RNFT2Q96EX2 444 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ZNF799Q96GE5 643 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 CCL19Q99731 98 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 CENPMQ9NSP4 180 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 EXOGQ9Y2C4 368 aaKnown RBP17.86■□□□□ 0.45
CD44-222ENST00000526025 KLHDC2Q9Y2U9 406 aa17.86■□□□□ 0.45
CD44-222ENST00000526025 ZNF670-ZNF695F2Z2N8 137 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 F5H5K5 113 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 J3QRE1 110 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 PDZD2O15018 2839 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 SOD3P08294 240 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 GNAO1P09471 354 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 DBTP11182 482 aaKnown RBP17.85■□□□□ 0.45
CD44-222ENST00000526025 CD53P19397 219 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 DCTDP32321 178 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 ATP6V1E1P36543 226 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 PPP1CBP62140 327 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 ACTC1P68032 377 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 ACTA1P68133 377 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 EGR3Q06889 387 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 RAB40BQ12829 278 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 C11orf71Q6IPW1 123 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 THAP5Q7Z6K1 395 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 CDH24Q86UP0 819 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 OR5L1Q8NGL2 311 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 LIME1Q9H400 295 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 SP140LQ9H930 580 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 COPS3Q9UNS2 423 aa17.85■□□□□ 0.45
CD44-222ENST00000526025 IGLV3-9A0A075B6K5 115 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 NGFP01138 241 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 CD8AP01732 235 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 LCKP06239 509 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 H2BFMP0C1H6 154 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 BMP4P12644 408 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 PAX1P15863 534 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 DNASE1P24855 282 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 HSD11B1P28845 292 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 SWI5Q1ZZU3 235 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 ZNF718Q3SXZ3 478 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 MBNL2Q5VZF2 373 aaKnown RBP17.84■□□□□ 0.45
CD44-222ENST00000526025 VHLLQ6RSH7 139 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.84■□□□□ 0.45
CD44-222ENST00000526025 ZNF679Q8IYX0 411 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 NRGNQ92686 78 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 MARS2Q96GW9 593 aaKnown RBP17.84■□□□□ 0.45
CD44-222ENST00000526025 OR8B4Q96RC9 309 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 DOK1Q99704 481 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 MROQ9BYG7 248 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 ANKRD60Q9BZ19 345 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 PLK3Q9H4B4 646 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 AASSQ9UDR5 926 aa17.84■□□□□ 0.45
CD44-222ENST00000526025 IRGMA1A4Y4 181 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 OVOL3O00110 214 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 HCCSP53701 268 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 SELENOVP59797 346 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 CXCR4P61073 352 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 CDK5R2Q13319 367 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 MST1LQ2TV78 715 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 KLHL22Q53GT1 634 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 C6orf52Q5T4I8 152 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 ZNF322Q6U7Q0 402 aaPredicted RBP17.83■□□□□ 0.44
CD44-222ENST00000526025 KRT77Q7Z794 578 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 EGFL6Q8IUX8 553 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 CNIH3Q8TBE1 160 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 SLC25A40Q8TBP6 338 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 LGALS12Q96DT0 336 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 MYCBPQ99417 103 aaPredicted RBP17.83■□□□□ 0.44
CD44-222ENST00000526025 CXorf56Q9H5V9 222 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 INPP5EQ9NRR6 644 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 BEX4Q9NWD9 120 aaPredicted RBP17.83■□□□□ 0.44
CD44-222ENST00000526025 RAB26Q9ULW5 256 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 LAMP3Q9UQV4 416 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 ARID1AO14497 2285 aa17.83■□□□□ 0.44
CD44-222ENST00000526025 A0A1W2PQL4 384 aaPredicted RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 ACOD1A6NK06 481 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 FADS2O95864 444 aaKnown RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 IGHV3-13P01766 116 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 MYF6P23409 242 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 KLF3P57682 345 aaPredicted RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 PSMA6P60900 246 aaKnown RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 SNRPD2P62316 118 aaKnown RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 MOGQ16653 247 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 MSMPQ1L6U9 139 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 FBXW12Q6X9E4 464 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 SPATC1Q76KD6 591 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 ZNF283Q8N7M2 679 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 OR10H4Q8NGA5 316 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 SYNPRQ8TBG9 265 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 JAM3Q9BX67 310 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 MRPL37Q9BZE1 423 aaKnown RBP17.82■□□□□ 0.44
CD44-222ENST00000526025 OR51B6Q9H340 312 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 PLEKHA6Q9Y2H5 1048 aa17.82■□□□□ 0.44
CD44-222ENST00000526025 LRP12Q9Y561 859 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms