RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
LRRK1-202ENST00000525284 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
LRRK1-202ENST00000525284 ZIC5Q96T25 663 aa12.51□□□□□ -0.41
LRRK1-202ENST00000525284 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
LRRK1-202ENST00000525284 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
LRRK1-202ENST00000525284 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 C1orf105O95561 183 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 IL5P05113 134 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 PCSK6P29122 969 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OR1L3Q8NH93 324 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 NFAT5O94916 1531 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 SOD1P00441 154 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 SLC25A5P05141 298 aaKnown RBP12.5□□□□□ -0.41
LRRK1-202ENST00000525284 LIPAP38571 399 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 COL5A1-AS1Q5SY13 56 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 EIF4E3Q8N5X7 224 aaKnown RBP12.5□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
LRRK1-202ENST00000525284 SLC38A5Q8WUX1 472 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 SLC46A1Q96NT5 459 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 RSRP1Q9BUV0 290 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 NDUFB11Q9NX14 153 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 Q6ZNX1 250 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OR14A16Q8NHC5 309 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OPN1MWP04001 364 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 BCL6P41182 706 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 CAMPP49913 170 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 CYS1Q717R9 158 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 NTNG1Q9Y2I2 539 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 GLRA1P23415 457 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 EMP1P54849 157 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 B3GNTL1Q67FW5 361 aaPredicted RBP12.5□□□□□ -0.41
LRRK1-202ENST00000525284 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 ZFPM2Q8WW38 1151 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 CXorf58Q96LI9 332 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 PRSS21Q9Y6M0 314 aa12.5□□□□□ -0.41
LRRK1-202ENST00000525284 DCCP43146 1447 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 A0A087X0M5 115 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 A0A1B0GX30 115 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 GCGP01275 180 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 OR3A1P47881 315 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 DLX1P56177 255 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 VASH2Q86V25 355 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 OR2AK2Q8NG84 335 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 OR51E1Q8TCB6 317 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 CIB3Q96Q77 187 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 NUMBLQ9Y6R0 609 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 SCRG1O75711 98 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 LY86O95711 162 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 RAB38P57729 211 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 MED25Q71SY5 747 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 C11orf40Q8WZ69 217 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 NIPSNAP1Q9BPW8 284 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 CHST2Q9Y4C5 530 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 ZNF195O14628 629 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 GCAP28676 217 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 EPHA2P29317 976 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 ASCL1P50553 236 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 HERVK_113P61574 105 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 RHOBP62745 196 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PRDX4Q13162 271 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 LBHQ53QV2 105 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PRR14Q9BWN1 585 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 RBPJLQ9UBG7 517 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 GABRB1P18505 474 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 SSX1Q16384 188 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 Q56UQ5 140 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 DOK3Q7L591 496 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 LSRQ86X29 649 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 ZC3H12DA2A288 527 aaKnown RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 TFAP2AP05549 437 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 CD68P34810 354 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 ZNF77Q15935 545 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 RPEL1Q2QD12 228 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 GLCCI1Q86VQ1 547 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 DUS3LQ96G46 650 aaKnown RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 CPPED1Q9BRF8 314 aaPredicted RBP12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PRSS16Q9NQE7 514 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
LRRK1-202ENST00000525284 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 CTNSO60931 367 aa12.48□□□□□ -0.41
LRRK1-202ENST00000525284 RPLP1P05386 114 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms