RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 OR11G2Q8NGC1 345 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 STOML3Q8TAV4 291 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 E9PI62 339 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 OIP5O43482 229 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SULT1B1O43704 296 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 NXPH2O95156 264 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZFPL1O95159 310 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 EPXP11678 715 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ADH6P28332 368 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 C5orf49A4QMS7 147 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 GRPP07492 148 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF136P52737 540 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 STARD6P59095 220 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZXDAP98168 799 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SORDQ00796 357 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 FXNQ16595 210 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 BAK1Q16611 211 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 C2orf76Q3KRA6 126 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 C17orf47Q8NEP4 570 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SECTM1Q8WVN6 248 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SARAFQ96BY9 339 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF501Q96CX3 271 aaPredicted RBP11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZC3HAV1LQ96H79 300 aaKnown RBP11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SPIN2AQ99865 258 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 SPIN2BQ9BPZ2 258 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRAPPC2LQ9UL33 140 aa11.76□□□□□ -0.53
PCDHGB1-201ENST00000523390 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 CCDC163A0A0D9SF12 145 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 SMLR1H3BR10 107 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 KLK10O43240 276 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 SERPINA7P05543 415 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 CHRM2P08172 466 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 CSF3P09919 207 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 CRYBB2P43320 205 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 DMWDQ09019 674 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 PCK2Q16822 640 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 FAAP20Q6NZ36 180 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 C9orf40Q8IXQ3 194 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 SARGQ9BW04 601 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 FABP7O15540 132 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 UBBP0CG47 229 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 RAP2BP61225 183 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 RBM39Q14498 530 aaKnown RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 PCNPQ8WW12 178 aaKnown RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 VRK1Q99986 396 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 EXOSC3Q9NQT5 275 aaKnown RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 B3GNT2Q9NY97 397 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 TCFL5Q9UL49 500 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 PRICKLE3O43900 615 aaPredicted RBP11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 CD79BP40259 229 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 RBP2P50120 134 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 SSPNQ14714 243 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 ETFDHQ16134 617 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 TRILQ7L0X0 811 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 PDZD9Q8IXQ8 264 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR1S1Q8NH92 325 aa11.75□□□□□ -0.53
PCDHGB1-201ENST00000523390 NPY4RP50391 375 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 FOXC1Q12948 553 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF767PQ75MW2 155 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 CCDC71Q8IV32 467 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 WFDC6Q9BQY6 131 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLC22A23A1A5C7 686 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 MPZL1O95297 269 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 IGKV1D-16P01601 117 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ASAH1Q13510 395 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 WDR38Q5JTN6 314 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 GTPBP8Q8N3Z3 284 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 LSMEM1Q8N8F7 131 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR5H6Q8NGV6 325 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZFAND1Q8TCF1 268 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 C20orf85Q9H1P6 137 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLCO5A1Q9H2Y9 848 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 FBXL2Q9UKC9 423 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 RER1O15258 196 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SIX6O95475 246 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 OR8U9P0C7N5 309 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ACTBL2Q562R1 376 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ZNF546Q86UE3 836 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 MED18Q9BUE0 208 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 SLC22A20A6NK97 555 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 APOC3P02656 99 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 FAHP16930 419 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ATF1P18846 271 aa11.74□□□□□ -0.53
PCDHGB1-201ENST00000523390 ANXA7P20073 488 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms