RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SIRPB1O00241 398 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ABCD3P28288 659 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SERPINF1P36955 418 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ISL1P61371 349 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 FXNQ16595 210 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF626Q68DY1 528 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SLC35E1Q96K37 410 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SHPKQ9UHJ6 478 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 COPS3Q9UNS2 423 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 CLEC2LP0C7M8 214 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 MEOX1P50221 254 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 KIRREL2Q6UWL6 708 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 MTCH2Q9Y6C9 303 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 R4GMQ9 66 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 AKAP11Q9UKA4 1901 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 M0QYG6 137 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 DFFBO76075 338 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 DOC2BQ14184 412 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 ACSM5Q6NUN0 579 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 LIMS2Q7Z4I7 341 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 GALNT16Q8N428 558 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 OR51H1Q8NH63 302 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 NUDT8Q8WV74 236 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 A0A087WUJ7 227 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 CRYM-AS1A6NIL9 109 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 TMEM200CA6NKL6 621 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM74A1Q5RGS3 127 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 GABRG1Q8N1C3 465 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 OR1J1Q8NGS3 322 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 BTF3L4Q96K17 158 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 ALKBH3Q96Q83 286 aaPredicted RBP14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 SPNS1Q9H2V7 528 aa14.71□□□□□ -0.05
PCDHA3-201ENST00000522353 RPA2P15927 270 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 DDOSTP39656 456 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 HMGN3Q15651 99 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 BTLAQ7Z6A9 289 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 GPR87Q9BY21 358 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 SLC25A19Q9HC21 320 aa14.71□□□□□ -0.06
PCDHA3-201ENST00000522353 AGAP14A8MT82 685 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 YIF1AO95070 293 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 GNB3P16520 340 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 NPY4RP50391 375 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 GCNT2Q8N0V5 402 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 SLC38A9Q8NBW4 561 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 SMRP1Q8NCR6 262 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 GABARAPL3Q9BY60 117 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 SPTA1P02549 2419 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 ARRDC5A6NEK1 342 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 PRICKLE3O43900 615 aaPredicted RBP14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 GABRA4P48169 554 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 SIGLEC11Q96RL6 698 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 C11orf54Q9H0W9 315 aaPredicted RBP14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 GDF2Q9UK05 429 aaPredicted RBP14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 ZNF816-ZNF321PA0A0X1KG74 233 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 OR2W5A6NFC9 320 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 RAB4AP20338 218 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 HOXC8P31273 242 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 DRD3P35462 400 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 SLC35A2P78381 396 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 TMEM215Q68D42 235 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 OR2AK2Q8NG84 335 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 EDARADDQ8WWZ3 215 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 IGHV3-64DA0A0J9YX35 117 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 AQP6Q13520 282 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 Q6ZRG5 221 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 NOXO1Q8NFA2 376 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 FAM213BQ8TBF2 198 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 C3orf49Q96BT1 292 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 TECTBQ96PL2 329 aa14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 COL22A1Q8NFW1 1626 aaPredicted RBP14.7□□□□□ -0.06
PCDHA3-201ENST00000522353 FITM1A5D6W6 292 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 ZAR1LA6NP61 321 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 IMPA2O14732 288 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 NKX2-2O95096 273 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 UBE2KP61086 200 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 SLC17A1Q14916 467 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 EBPQ15125 230 aaKnown RBP14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 GSG1Q2KHT4 349 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 PBOV1Q9GZY1 135 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 SMOC1Q9H4F8 434 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 TAS2R5Q9NYW4 299 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 CNR1P21554 472 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 TMEM200AQ86VY9 491 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 RNF141Q8WVD5 230 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 ALG14Q96F25 216 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 RFX2P48378 723 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 TPBGQ13641 420 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 ANKRD37Q7Z713 158 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 NAA40Q86UY6 237 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 BATF2Q8N1L9 274 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 OR1S2Q8NGQ3 325 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 APOBEC4Q8WW27 367 aaKnown RBP14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 DVL3Q92997 716 aaPredicted RBP14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 CDCA4Q9BXL8 241 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 C20orf85Q9H1P6 137 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 COL18A1P39060 1754 aa14.69□□□□□ -0.06
PCDHA3-201ENST00000522353 PCBP4P57723 403 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms