RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MRPS34P82930 218 aaKnown RBP14.69□□□□□ -0.06
USP42-207ENST00000521713 LINC01555Q8NAE3 123 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 FAM3DQ96BQ1 224 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 EID2BQ96D98 161 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 DOK1Q99704 481 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 VN1R1Q9GZP7 353 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 C12orf10Q9HB07 376 aa14.69□□□□□ -0.06
USP42-207ENST00000521713 TRGV8A0A0C4DH27 118 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 H7C1Q1 480 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 CRYAAP02489 173 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 SSPNQ14714 243 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 MOB1AQ9H8S9 216 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 ZNF93P35789 620 aaPredicted RBP14.68□□□□□ -0.06
USP42-207ENST00000521713 CATR1Q13166 79 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 CTF1Q16619 201 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 Q6ZTK2 550 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 DOK3Q7L591 496 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 HSD17B8Q92506 261 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 KCNIP2Q9NS61 270 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 SLC39A9Q9NUM3 307 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 GNG12Q9UBI6 72 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 RGPD4Q7Z3J3 1758 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 BCKDHBP21953 392 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 CLDN12P56749 244 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 RNF165Q6ZSG1 346 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 FBXO4Q9UKT5 387 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 ANKUB1A6NFN9 424 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 CPN1P15169 458 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 CALCRP30988 508 aa14.68□□□□□ -0.06
USP42-207ENST00000521713 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■■■□□ 14.8
USP42-207ENST00000521713 A0A1W2PPH5 198 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 PPP5D1E7EU14 171 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 ACHEP22303 614 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 H3F3AP84243 136 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 NAA40Q86UY6 237 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 OR2V1Q8NHB1 315 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 POFUT1Q9H488 388 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 ZCCHC4Q9H5U6 513 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 ZNF346Q9UL40 294 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 RPL18Q07020 188 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 HES3Q5TGS1 186 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 OR2A2Q6IF42 318 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 JMJD6Q6NYC1 403 aaPredicted RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 BAGE3Q86Y29 109 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 BAGE2Q86Y30 109 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 FGGYQ96C11 551 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 KCNG2Q9UJ96 466 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 SLC22A20A6NK97 555 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 OR1C1Q15619 314 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 TAF9Q16594 264 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 PDLIM3Q53GG5 364 aaPredicted RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 TIMD4Q96H15 378 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 ZC3HAV1LQ96H79 300 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 TXNIPQ9H3M7 391 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 NKX2-2O95096 273 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 ANXA7P20073 488 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 SRSF5Q13243 272 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 ZNF239Q16600 458 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 NAXDQ8IW45 347 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 LGI3Q8N145 548 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 OR4N2Q8NGD1 307 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 C2CD4CQ8TF44 421 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 SELENOIQ9C0D9 397 aa14.67□□□□□ -0.06
USP42-207ENST00000521713 RBM38Q9H0Z9 239 aaKnown RBP14.67□□□□□ -0.06
USP42-207ENST00000521713 A0A1B0GTL3 188 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 SELENOFO60613 162 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 BLVRBP30043 206 aaPredicted RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 KIR2DL3P43628 341 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 SSBP1Q04837 148 aaKnown RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 TPBGQ13641 420 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 FAHD1Q6P587 224 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 USP51Q70EK9 711 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ST8SIA2Q92186 375 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ANKRD9Q96BM1 317 aaPredicted RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 LANCL2Q9NS86 450 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 TBXA2RP21731 343 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 SRP9P49458 86 aaKnown RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 RHBDD2Q6NTF9 364 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 PTOV1Q86YD1 416 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 SFTPA1Q8IWL2 248 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 PRSS35Q8N3Z0 413 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ZNF439Q8NDP4 499 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OR5M8Q8NGP6 311 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 SERTM1A2A2V5 107 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 KITLGP21583 273 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 PSMB3P49720 205 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 DIO1P49895 249 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OR2L13Q8N349 312 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 C15orf54Q8N8G6 183 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OR51S1Q8NGJ8 323 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 CRLF2Q9HC73 371 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ARID1BQ8NFD5 2236 aaPredicted RBP14.66□□□□□ -0.06
USP42-207ENST00000521713 LRP5LA4QPB2 252 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 CYTIPO60759 359 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 ZXDAP98168 799 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OR8B8Q15620 311 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OR11G2Q8NGC1 345 aa14.66□□□□□ -0.06
USP42-207ENST00000521713 OPALINQ96PE5 141 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms