RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 OR2L3Q8NG85 312 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 OR10G4Q8NGN3 311 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 CLHC1Q8NHS4 586 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 LHFPL5Q8TAF8 219 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SYNPRQ8TBG9 265 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 FAM3DQ96BQ1 224 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 WFIKKN1Q96NZ8 548 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 OR2A5Q96R48 311 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SLC29A1Q99808 456 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 BCL7BQ9BQE9 202 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 MRPL37Q9BZE1 423 aaKnown RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 TRIM45Q9H8W5 580 aaPredicted RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 LZTFL1Q9NQ48 299 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 STMN3Q9NZ72 180 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 NUP50Q9UKX7 468 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 AP3M1Q9Y2T2 418 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 HEY1Q9Y5J3 304 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 REREQ9P2R6 1566 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 MAP3K1Q13233 1512 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 FAM135AQ9P2D6 1515 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 LRPPRCP42704 1394 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 RB1CC1Q8TDY2 1594 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 IGHV3-66A0A0C4DH42 116 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 TMEM150BA6NC51 233 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 LRCOL1A6NCL2 159 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 POLR1CO15160 346 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 RBBP9O75884 186 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 UTS2O95399 124 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 C6orf47O95873 294 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 GNAO1P09471 354 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 RAB4AP20338 218 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 GDI1P31150 447 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 BMI1P35226 326 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 HRH1P35367 487 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 PMELP40967 661 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 PPP1R2P41236 205 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 HTR2BP41595 481 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 CDKN2BP42772 138 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 AP1S2P56377 157 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 GNG2P59768 71 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 YWHAGP61981 247 aaKnown RBP eCLIP3.01□□□□□ -1.93
SKP1-208ENST00000521216 ELF3P78545 371 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 MRPS22P82650 360 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 ERCC8Q13216 396 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 POU2AF1Q16633 256 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 C6orf183Q5T699 404 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 PTRHD1Q6GMV3 140 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 PPP1R2P3Q6NXS1 205 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 PRMT9Q6P2P2 845 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 HDDC2Q7Z4H3 204 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 LRRC6Q86X45 466 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 CDKL3Q8IVW4 592 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 NECAB1Q8N987 351 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 OR13C2Q8NGS9 318 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 RHEBL1Q8TAI7 183 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 ASZ1Q8WWH4 475 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 FRZBQ92765 325 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 FBXO32Q969P5 355 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 CCDC127Q96BQ5 260 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 LRRC39Q96DD0 335 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 LLPHQ9BRT6 129 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 LINC00597Q9H2U6 94 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 SYNDIG1Q9H7V2 258 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 MRPL40Q9NQ50 206 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 ZNF629Q9UEG4 869 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 DNAJC12Q9UKB3 198 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 RPL26L1Q9UNX3 145 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 ERGIC3Q9Y282 383 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 YTHDF2Q9Y5A9 579 aaKnown RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 WDR62O43379 1518 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 MAPKBP1O60336 1514 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 SLIT3O75094 1523 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 ZNF608Q9ULD9 1512 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 TET2Q6N021 2002 aaPredicted RBP3.01□□□□□ -1.93
SKP1-208ENST00000521216 PLB1Q6P1J6 1458 aa3.01□□□□□ -1.93
SKP1-208ENST00000521216 TRAV39A0A0B4J263 110 aa3□□□□□ -1.93
SKP1-208ENST00000521216 A0A1B0GTQ1 180 aa3□□□□□ -1.93
SKP1-208ENST00000521216 A0A1W2PQ67 120 aa3□□□□□ -1.93
SKP1-208ENST00000521216 TMEM210A6NLX4 147 aa3□□□□□ -1.93
SKP1-208ENST00000521216 ANKRD65E5RJM6 399 aa3□□□□□ -1.93
SKP1-208ENST00000521216 K7ERQ8 282 aa3□□□□□ -1.93
SKP1-208ENST00000521216 PLEKHA8P1O95397 391 aa3□□□□□ -1.93
SKP1-208ENST00000521216 CLIC3O95833 236 aa3□□□□□ -1.93
SKP1-208ENST00000521216 SLC2A3P11169 496 aa3□□□□□ -1.93
SKP1-208ENST00000521216 FOLR1P15328 257 aa3□□□□□ -1.93
SKP1-208ENST00000521216 TNNI1P19237 187 aa3□□□□□ -1.93
SKP1-208ENST00000521216 TAGLN2P37802 199 aaKnown RBP3□□□□□ -1.93
SKP1-208ENST00000521216 CRYBB2P43320 205 aa3□□□□□ -1.93
SKP1-208ENST00000521216 AP2S1P53680 142 aaPredicted RBP3□□□□□ -1.93
SKP1-208ENST00000521216 PSMD4P55036 377 aaKnown RBP3□□□□□ -1.93
SKP1-208ENST00000521216 CDH6P55285 790 aa3□□□□□ -1.93
SKP1-208ENST00000521216 CARD18P57730 90 aa3□□□□□ -1.93
SKP1-208ENST00000521216 GPX6P59796 221 aa3□□□□□ -1.93
SKP1-208ENST00000521216 RPL10AP62906 217 aaKnown RBP3□□□□□ -1.93
SKP1-208ENST00000521216 BST2Q10589 180 aaKnown RBP3□□□□□ -1.93
SKP1-208ENST00000521216 STX3Q13277 289 aa3□□□□□ -1.93
SKP1-208ENST00000521216 SAPCD1Q5SSQ6 148 aa3□□□□□ -1.93
SKP1-208ENST00000521216 THEM4Q5T1C6 240 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms