RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 CYP2R1Q6VVX0 501 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 ZNF620Q6ZNG0 422 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 USP43Q70EL4 1123 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 LINC00346Q8IVM7 164 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 JMJD8Q96S16 334 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 PATZ1Q9HBE1 687 aaKnown RBP17.3■□□□□ 0.36
SNHG6-203ENST00000520944 GCM1Q9NP62 436 aa17.3■□□□□ 0.36
SNHG6-203ENST00000520944 PPIAL4EA0A075B759 164 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 PPIAL4CA0A0B4J2A2 164 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 PPIAL4DF5H284 164 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 PPIAL4FP0DN26 164 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 ZNF823P16415 610 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 HMGA2P52926 109 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 MALLQ13021 153 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 HNRNPA0Q13151 305 aaKnown RBP17.29■□□□□ 0.36
SNHG6-203ENST00000520944 CFAP77Q6ZQR2 320 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.29■□□□□ 0.36
SNHG6-203ENST00000520944 SEMA6DQ8NFY4 1073 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 OR10AD1Q8NGE0 317 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 ATF6BQ99941 703 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 SUCNR1Q9BXA5 334 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 C1QTNF5Q9BXJ0 243 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 FN3KQ9H479 309 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 EGLN3Q9H6Z9 239 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 WDR76Q9H967 626 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 TMEM100Q9NV29 134 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 ACTR3BQ9P1U1 418 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 CYB5R1Q9UHQ9 305 aa17.29■□□□□ 0.36
SNHG6-203ENST00000520944 TMEM178BH3BS89 294 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 ZFP36P26651 326 aaKnown RBP17.28■□□□□ 0.36
SNHG6-203ENST00000520944 MDH2P40926 338 aaKnown RBP17.28■□□□□ 0.36
SNHG6-203ENST00000520944 DBPQ10586 325 aaPredicted RBP17.28■□□□□ 0.36
SNHG6-203ENST00000520944 ZMYND11Q15326 602 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 RSPO1Q2MKA7 263 aaPredicted RBP17.28■□□□□ 0.36
SNHG6-203ENST00000520944 C12orf54Q6X4T0 127 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 MUC20Q8N307 709 aaPredicted RBP17.28■□□□□ 0.36
SNHG6-203ENST00000520944 BPIFB2Q8N4F0 458 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 BHLHE23Q8NDY6 225 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 PROKR2Q8NFJ6 384 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 MEGF10Q96KG7 1140 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 SLC30A2Q9BRI3 323 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 TRIM15Q9C019 465 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 KCNG2Q9UJ96 466 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 LYVE1Q9Y5Y7 322 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 CDH10Q9Y6N8 788 aa17.28■□□□□ 0.36
SNHG6-203ENST00000520944 IQCF6A8MYZ5 107 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 B2RBV5 119 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 TRIM77I1YAP6 450 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 LCATP04180 440 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 ACSM4P0C7M7 580 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 FPR2P25090 351 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 GGT2P36268 569 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 RBMXP38159 391 aaKnown RBP17.27■□□□□ 0.36
SNHG6-203ENST00000520944 SLC6A9P48067 706 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 TPTEP56180 551 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 HILS1P60008 231 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 TRAP1Q12931 704 aaKnown RBP17.27■□□□□ 0.36
SNHG6-203ENST00000520944 COLCA1Q6ZS62 124 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 OR9Q2Q8NGE9 314 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 OR2T4Q8NH00 348 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 SIGLEC11Q96RL6 698 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 OPN4Q9UHM6 478 aa17.27■□□□□ 0.36
SNHG6-203ENST00000520944 LRRC30A6NM36 301 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 H0YL77 283 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 CCNB2O95067 398 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 GASTP01350 101 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 MMP16P51512 607 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 ACTG1P63261 375 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 KRTAP27-1Q3LI81 207 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 ESCO2Q56NI9 601 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 ARHGAP24Q8N264 748 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 ZNF420Q8TAQ5 688 aaPredicted RBP17.26■□□□□ 0.35
SNHG6-203ENST00000520944 SPTSSAQ969W0 71 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 NSL1Q96IY1 281 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 IL20Q9NYY1 176 aa17.26■□□□□ 0.35
SNHG6-203ENST00000520944 WNK2Q9Y3S1 2297 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 F5H5P2 479 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 BHLHE40O14503 412 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 ATP6V1B2P21281 511 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 GK2Q14410 553 aaPredicted RBP17.25■□□□□ 0.35
SNHG6-203ENST00000520944 RASSF6Q6ZTQ3 369 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 PGAP1Q75T13 922 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 DHFR2Q86XF0 187 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 C1orf87Q8N0U7 546 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 CYB561A3Q8NBI2 242 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 FAM216AQ8WUB2 273 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 SPRYD4Q8WW59 207 aaPredicted RBP17.25■□□□□ 0.35
SNHG6-203ENST00000520944 SLCO4A1Q96BD0 722 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 SLC6A7Q99884 636 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 BTBD10Q9BSF8 475 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 MMP26Q9NRE1 261 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 MRPL22Q9NWU5 206 aaKnown RBP17.25■□□□□ 0.35
SNHG6-203ENST00000520944 OR5V1Q9UGF6 321 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 POLR3KQ9Y2Y1 108 aaPredicted RBP17.25■□□□□ 0.35
SNHG6-203ENST00000520944 AUP1Q9Y679 476 aa17.25■□□□□ 0.35
SNHG6-203ENST00000520944 DYSFO75923 2080 aa17.24■□□□□ 0.35
SNHG6-203ENST00000520944 IGHV3-64DA0A0J9YX35 117 aa17.24■□□□□ 0.35
SNHG6-203ENST00000520944 MLNRO43193 412 aa17.24■□□□□ 0.35
SNHG6-203ENST00000520944 CYB5R3P00387 301 aaPredicted RBP17.24■□□□□ 0.35
SNHG6-203ENST00000520944 IRF2P14316 349 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms