RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 WNT2P09544 360 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 HKR1P10072 659 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 PRTN3P24158 256 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 COX10Q12887 443 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 FOXL1Q12952 345 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 BAMBIQ13145 260 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 TUSC1Q2TAM9 212 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 LEG1Q6P5S2 330 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 MOGAT3Q86VF5 341 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 CMTM5Q96DZ9 223 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 NMNAT3Q96T66 252 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 FUZQ9BT04 418 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
CSMD1-207ENST00000520451 SRA1Q9HD15 236 aaKnown RBP12.72□□□□□ -0.37
CSMD1-207ENST00000520451 SPAG4Q9NPE6 437 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 PCDHGB1Q9Y5G3 927 aa12.72□□□□□ -0.37
CSMD1-207ENST00000520451 IGHV3OR16-10A0A075B7F0 116 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 LRRC30A6NM36 301 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 IQCF6A8MYZ5 107 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 RENP00797 406 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 SLC6A6P31641 620 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 CD80P33681 288 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 MDH1P40925 334 aaKnown RBP12.71□□□□□ -0.37
CSMD1-207ENST00000520451 PRSS12P56730 875 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 GNB2P62879 340 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 SPIBQ01892 262 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 PAX8Q06710 450 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-207ENST00000520451 BTNL3Q6UXE8 466 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 CFAP77Q6ZQR2 320 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 KLBQ86Z14 1044 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 LINC00346Q8IVM7 164 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 OR6V1Q8N148 313 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 RNF148Q8N7C7 305 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 SLC26A10Q8NG04 563 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-207ENST00000520451 IFT27Q9BW83 186 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 HCAR1Q9BXC0 346 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 MS4A7Q9GZW8 240 aaPredicted RBP12.71□□□□□ -0.37
CSMD1-207ENST00000520451 OR52D1Q9H346 318 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 TMEM165Q9HC07 324 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 MIOXQ9UGB7 285 aa12.71□□□□□ -0.37
CSMD1-207ENST00000520451 GADD45GO95257 159 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 HLA-DPB1P04440 258 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 HIST1H1CP16403 213 aaKnown RBP12.7□□□□□ -0.38
CSMD1-207ENST00000520451 SELEP16581 610 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 CPT2P23786 658 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 FPR3P25089 353 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 SMIM11AP58511 58 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 RSPO1Q2MKA7 263 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-207ENST00000520451 RFX4Q33E94 735 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 SLC18B1Q6NT16 456 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 LRRN1Q6UXK5 716 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 C1orf87Q8N0U7 546 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 PARP8Q8N3A8 854 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-207ENST00000520451 PLEKHA8Q96JA3 519 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 C1orf147Q96MC9 270 aaPredicted RBP12.7□□□□□ -0.38
CSMD1-207ENST00000520451 PITX2Q99697 317 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 ATF6BQ99941 703 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 TMEM246Q9BRR3 403 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF747Q9BV97 191 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 CDADC1Q9BWV3 514 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 RPRD1BQ9NQG5 326 aaKnown RBP12.7□□□□□ -0.38
CSMD1-207ENST00000520451 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 MEGF8Q7Z7M0 2845 aa12.7□□□□□ -0.38
CSMD1-207ENST00000520451 IGHV2-70DA0A0C4DH43 119 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 F5H5K5 113 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 ARPC3O15145 178 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 OR10H3O60404 316 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 HLA-DQA2P01906 255 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 ACSM4P0C7M7 580 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 IGHV4-38-2P0DP08 117 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 NOS3P29474 1203 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 PMELP40967 661 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 PAX2Q02962 417 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 TRAP1Q12931 704 aaKnown RBP12.69□□□□□ -0.38
CSMD1-207ENST00000520451 ECH1Q13011 328 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 KRTAP27-1Q3LI81 207 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 ZNF404Q494X3 552 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 SLC36A3Q495N2 470 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 SHISA2Q6UWI4 295 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 OR8B3Q8NGG8 313 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 OR2AJ1Q8NGZ0 328 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 PYURFQ96I23 114 aa12.69□□□□□ -0.38
CSMD1-207ENST00000520451 OR8B2Q96RD0 313 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms