RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SMKR1H3BMG3 65 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 NVLO15381 856 aaKnown RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 RAD51CO43502 376 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 CHST10O43529 356 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 ERLIN1O75477 346 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 GCM2O75603 506 aaPredicted RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 H6PDO95479 791 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 HLA-DQA1P01909 254 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 U2AF2P26368 475 aaKnown RBP eCLIP1.73□□□□□ -2.131e-9■■■■□ 21.1
SKP1-207ENST00000520417 GTF2E2P29084 291 aaKnown RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 RGS8P57771 180 aaPredicted RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 SELENBP1Q13228 472 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 RCN1Q15293 331 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 ZNF726P1Q15940 193 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 UBE2UQ5VVX9 321 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 TMEM205Q6UW68 189 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 C12orf54Q6X4T0 127 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 GTPBP8Q8N3Z3 284 aaPredicted RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 CBR4Q8N4T8 237 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 COX18Q8N8Q8 333 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 SNX31Q8N9S9 440 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 OR4K5Q8NGD3 323 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 OR10AD1Q8NGE0 317 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 LILRB4Q8NHJ6 448 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 LYPD6BQ8NI32 183 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 LINC01560Q8TB33 94 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 NUBPLQ8TB37 319 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 OR51E1Q8TCB6 317 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 PTX4Q96A99 478 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 DCPSQ96C86 337 aaKnown RBP1.73□□□□□ -2.13
SKP1-207ENST00000520417 ZNF488Q96MN9 340 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 LZTS2Q9BRK4 669 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 LHX5Q9H2C1 402 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 ZNF160Q9HCG1 818 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 ENOPH1Q9UHY7 261 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 VANGL2Q9ULK5 521 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 RABL2BQ9UNT1 228 aa1.73□□□□□ -2.13
SKP1-207ENST00000520417 NINLQ9Y2I6 1382 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 IGHV1OR15-9A0A0B4J2B8 117 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 TRBV11-1A0A0K0K1C0 115 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 A0A0U1RQV1 116 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CTAGE15A4D2H0 777 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 OR2AG2A6NM03 316 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 SYCE1LA8MT33 242 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 H7C0C1 242 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 AP3B1O00203 1094 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 NDUFAB1O14561 156 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 BPY2O14599 106 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 HUS1O60921 280 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CLDN11O75508 207 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 SEMA3DO95025 777 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 AGTP01019 485 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 KRT14P02533 472 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 GLAP06280 429 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 SERPINE2P07093 398 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 ZNF688P0C7X2 276 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 MYL2P10916 166 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CD37P11049 281 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 ATP5OP48047 213 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CXCL12P48061 93 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 C21orf59P57076 290 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 LRRC74AQ0VAA2 488 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 ART3Q13508 389 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 ZNF266Q14584 549 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 TRAM2Q15035 370 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CHRNA6Q15825 494 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 MPV17L2Q567V2 206 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 AVPI1Q5T686 147 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 LRRC66Q68CR7 880 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 UNQ9165/PRO28630Q6UXU0 137 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CTAGE6Q86UF2 777 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 NKAIN4Q8IVV8 208 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 CDKL3Q8IVW4 592 aaPredicted RBP1.72□□□□□ -2.13
SKP1-207ENST00000520417 FAM71AQ8IYT1 594 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 OR11H7Q8NGC8 314 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 OR52E2Q8NGJ4 325 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 OR13G1Q8NGZ3 307 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 MCUR1Q96AQ8 359 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 TBL1YQ9BQ87 522 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 OR52D1Q9H346 318 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 C1orf198Q9H425 327 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 SLC38A10Q9HBR0 1119 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 NEK6Q9HC98 313 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 RETNQ9HD89 108 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 AKNAQ7Z591 1439 aa1.72□□□□□ -2.13
SKP1-207ENST00000520417 H7C417 338 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 SCAMP2O15127 329 aaKnown RBP1.71□□□□□ -2.14
SKP1-207ENST00000520417 EIF4E2O60573 245 aaKnown RBP1.71□□□□□ -2.14
SKP1-207ENST00000520417 SLC22A5O76082 557 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 OR8U9P0C7N5 309 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 CT45A6P0DMU7 189 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 CT45A5P0DMU8 189 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 CT45A7P0DMV0 189 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 IL1RNP18510 177 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 BCKDHBP21953 392 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 IL32P24001 234 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 OTX1P32242 354 aaPredicted RBP1.71□□□□□ -2.14
SKP1-207ENST00000520417 RBM34P42696 430 aaKnown RBP1.71□□□□□ -2.14
SKP1-207ENST00000520417 SYKP43405 635 aa1.71□□□□□ -2.14
SKP1-207ENST00000520417 RAB7AP51149 207 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms