RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ATPIF1Q9UII2 106 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
IGHV3-42-201ENST00000520410 MXRA5Q9NR99 2828 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 F5H5P2 479 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 H0YL77 283 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 J3QW42 95 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 CYB5R3P00387 301 aaPredicted RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SEMG1P04279 462 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 IRF2P14316 349 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 RPS2P15880 293 aaKnown RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SELEP16581 610 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 FPR2P25090 351 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 PYCR1P32322 319 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MDH2P40926 338 aaKnown RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MMP16P51512 607 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SEC61A1P61619 476 aaKnown RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 TSPAN31Q12999 210 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZMYND11Q15326 602 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 KCNMB1Q16558 191 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 PGBD2Q6P3X8 592 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZNF620Q6ZNG0 422 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MRPL21Q7Z2W9 205 aaKnown RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MOGAT3Q86VF5 341 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MUC20Q8N307 709 aaPredicted RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 CYB561A3Q8NBI2 242 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SEMA6DQ8NFY4 1073 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC26A10Q8NG04 563 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR9Q2Q8NGE9 314 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 SPRYD4Q8WW59 207 aaPredicted RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 MEGF10Q96KG7 1140 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 FUZQ9BT04 418 aa13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 PATZ1Q9HBE1 687 aaKnown RBP13.61□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR6C68A6NDL8 312 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TVP23AA6NH52 213 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 LRRC30A6NM36 301 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 CCNB2O95067 398 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 ZFP36P26651 326 aaKnown RBP13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TPTEP56180 551 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 COX10Q12887 443 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TAF13Q15543 124 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TMEM155Q4W5P6 130 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 FBXW12Q6X9E4 464 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 LNX2Q8N448 690 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 IL1RAPQ9NPH3 570 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 AUP1Q9Y679 476 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 CDH10Q9Y6N8 788 aa13.6□□□□□ -0.23
IGHV3-42-201ENST00000520410 TMEM178BH3BS89 294 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 ARPC3O15145 178 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 HLA-DPB1P04440 258 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 SPARCP09486 303 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 GGT2P36268 569 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 MNAT1P51948 309 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 HILS1P60008 231 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 PPP1R8Q12972 351 aaKnown RBP13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 ECH1Q13011 328 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 SLC18B1Q6NT16 456 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 RPL13AP3Q6NVV1 102 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 C1orf87Q8N0U7 546 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 BOLLQ8N9W6 283 aaKnown RBP13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR51L1Q8NGJ5 315 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 OR9Q1Q8NGQ5 310 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 SPTSSAQ969W0 71 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 OTULINQ96BN8 352 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 RBM4Q9BWF3 364 aaKnown RBP13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 GCM1Q9NP62 436 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 PPIAL4AQ9Y536 164 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 TANC2Q9HCD6 1990 aa13.59□□□□□ -0.23
IGHV3-42-201ENST00000520410 CEACAM18A8MTB9 384 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 B2RBV5 119 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 M0R135 149 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 IDH3BO43837 385 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 KRT36O76013 467 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 ACSM4P0C7M7 580 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 ATP6V1B2P21281 511 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 GSSP48637 474 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 GNB2P62879 340 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 LRRC28Q86X40 367 aaPredicted RBP13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 AQP11Q8NBQ7 271 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 OR2T4Q8NH00 348 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 LRGUKQ96M69 825 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 COPS4Q9BT78 406 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 REEP1Q9H902 201 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 MMP26Q9NRE1 261 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 UFSP2Q9NUQ7 469 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 LYVE1Q9Y5Y7 322 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 U3KQV3 271 aa13.58□□□□□ -0.24
IGHV3-42-201ENST00000520410 FBN3Q75N90 2809 aa13.57□□□□□ -0.24
IGHV3-42-201ENST00000520410 IGHV3OR16-10A0A075B7F0 116 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms